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SCNpilot_cont_750_bf_scaffold_586

Search features with annotation key words

Displaying items 31-60 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_586_31
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32544..33065)
DNA (522bp) protein (174aa)
RNase III inhibitor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W292_9GAMM
RNase III inhibitor {ECO:0000313|EMBL:EIL93583.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative phosphatase, C-terminal domain of histone macro H2A1 like protein
SCNpilot_cont_750_bf_scaffold_586_32
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33122..33586
DNA (465bp) protein (155aa)
Putative MarR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT42_9GAMM
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:EIM02634.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_586_33
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33780..34907
DNA (1128bp) protein (376aa)
Secretion protein HlyD n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9J6_9GAMM rbh
Secretion protein HlyD {ECO:0000313|EMBL:EIL96137.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
RND family efflux transporter, MFP subunit rbh
SCNpilot_cont_750_bf_scaffold_586_34
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35463..35678)
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_cont_750_bf_scaffold_586_35
unknown

Not on your lists

comp(35763..36023)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_586_36
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36287..38065
DNA (1779bp) protein (593aa)
multidrug transporter n=1 Tax=Dyella japonica RepID=UPI000366E84F
Acriflavine resistance protein B {ECO:0000313|EMBL:AHX15841.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cation/multidrug efflux pump
SCNpilot_cont_750_bf_scaffold_586_37
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38121..39557)
DNA (1437bp) protein (479aa)
Aminopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W287_9GAMM rbh
Aminopeptidase {ECO:0000313|EMBL:EIL93578.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative aminopeptidase rbh
SCNpilot_cont_750_bf_scaffold_586_38
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39674..40084)
DNA (411bp) protein (137aa)
Large-conductance mechanosensitive channel n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW6_9GAMM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
large conductance mechanosensitive channel protein
SCNpilot_cont_750_bf_scaffold_586_39
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40184..40939)
DNA (756bp) protein (252aa)
2-keto-4-pentenoate hydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV0_9GAMM
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:AGG90390.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_586_40
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40983..42239
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02641.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RND family efflux transporter, MFP subunit
SCNpilot_cont_750_bf_scaffold_586_41
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42306..42992
DNA (687bp) protein (229aa)
ABC transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W852_9GAMM rbh
ABC transporter {ECO:0000313|EMBL:EIL95643.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, ATPase component
SCNpilot_cont_750_bf_scaffold_586_42
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43174..44337
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W853_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95644.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type transport system, involved in lipoprotein release, permease component
SCNpilot_cont_750_bf_scaffold_586_43
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44348..45655
DNA (1308bp) protein (436aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI000374C97D
Uncharacterized protein {ECO:0000313|EMBL:EIL90038.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ABC-type transport system, involved in lipoprotein release, permease component
SCNpilot_cont_750_bf_scaffold_586_44
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45739..47154)
DNA (1416bp) protein (472aa)
Putative short-chain fatty acids transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W856_9GAMM rbh
Putative short-chain fatty acids transporter {ECO:0000313|EMBL:EIL95647.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
short chain fatty acids transporter rbh
SCNpilot_cont_750_bf_scaffold_586_45
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47241..48158)
DNA (918bp) protein (306aa)
Putative DMT superfamily transporter inner membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W857_9GAMM rbh
Putative DMT superfamily transporter inner membrane protein {ECO:0000313|EMBL:EIL95648.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DMT(drug/metabolite transporter) superfamily permease rbh
SCNpilot_cont_750_bf_scaffold_586_46
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48354..49238)
DNA (885bp) protein (295aa)
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00038200A5 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF46856.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_bf_scaffold_586_47
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49307..49579)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W278_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93569.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_586_48
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49658..50002
DNA (345bp) protein (115aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSX4_9GAMM
Ferredoxin {ECO:0000313|EMBL:AHX15853.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
SCNpilot_cont_750_bf_scaffold_586_49
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50205..50699
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W074_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92865.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_586_50
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50692..51426
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W075_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92866.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_586_51
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51464..53281)
DNA (1818bp) protein (606aa)
Di-/tricarboxylate transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU0_9GAMM rbh
di-/tricarboxylate transporter rbh
Di-/tricarboxylate transporter {ECO:0000313|EMBL:AGG90380.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_586_52
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53806..54504)
DNA (699bp) protein (233aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33) rbh
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Dyella japonica RepID=UPI0002ED6EC2 rbh
SCNpilot_cont_750_bf_scaffold_586_53
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54672..55472)
DNA (801bp) protein (267aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Thiazole synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8J9_9GAMM rbh
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG rbh
SCNpilot_cont_750_bf_scaffold_586_54
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55538..55738)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000318E4BE
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:AIF46862.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
thiS; sulfur carrier protein; K03154 sulfur carrier protein
SCNpilot_cont_750_bf_scaffold_586_55
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55825..58137)
DNA (2313bp) protein (771aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSX8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM02570.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Fe2+-dicitrate sensor, membrane component rbh
SCNpilot_cont_750_bf_scaffold_586_56
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59354..60979
DNA (1626bp) protein (542aa)
Retron-type reverse transcriptase (EC:2.7.7.49) rbh
Retron-type reverse transcriptase {ECO:0000313|EMBL:AGG90376.1}; EC=2.7.7.49 {ECO:0000313|EMBL:AGG90376.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Retron-type reverse transcriptase n=1 Tax=Rhodanobacter denitrificans RepID=M4NS56_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_586_57
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61193..61705
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVT1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90375.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_586_58
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61702..62625
DNA (924bp) protein (308aa)
Probable alpha-L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
ribosomal protein S6 modification protein n=1 Tax=Dyella japonica RepID=UPI000303ED12 rbh
alpha-L-glutamate ligase, RimK family rbh
SCNpilot_cont_750_bf_scaffold_586_59
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62908..63594
DNA (687bp) protein (229aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSY2_9GAMM rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EIM02574.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
SCNpilot_cont_750_bf_scaffold_586_60
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63578..64861
DNA (1284bp) protein (428aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS36_9GAMM rbh
signal transduction histidine kinase rbh
Displaying items 31-60 of 83 in total

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