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SCNpilot_cont_750_bf_scaffold_2634_7

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 45 / 55 BSCG 47 / 51 MC: 2 ASCG 7 / 38
Location: comp(6227..6895)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Microbacterium yannicii RepID=UPI0003195C84 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 235.0
  • Bit_score: 370
  • Evalue 1.00e-99
  • rbh
ECF RNA polymerase sigma factor SigR {ECO:0000313|EMBL:KJL35648.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 221.0
  • Bit_score: 365
  • Evalue 6.10e-98
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 228.0
  • Bit_score: 361
  • Evalue 2.00e-97
  • rbh

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGATCGCCACCCTGGAACGCCCCGCAGCGGGGCCCCCGGCGAGCTCCGAGGGGCCGCACGTAGACTGGCTGCTGATGAACGACGAGGCACCGGCCGCCAGCGACCCGCGGACCCAGTTCGAAGAGCAGGCCCTTCCCTTCATGGACCAGCTCTACGCGGCTGCCATGCGGATGACGCGCAATCCCGCCGACGCCGCCGATCTGGTGCAGGAGACGTTCGTAAAGGCGTTCGCCTCGTGGAAGACCTTCACGCAGGGGACCAACCTCAAGGCGTGGCTCTACCGCATCCTCACCAACACCTACATCAACACGTATCGCAAGAAGCAGCGAGAGCCCTATCAGGGCACCATCGACGACCTCGAGGATTGGCAGCTCGGGGGAGCGGAGTCGACGACGGCGACGAGCACGCGCTCGGCCGAGGCGGAGGCGATCGACCGGATGCCCGCATCCGTCGTGAAGGACGCCCTGCAGTCGATCCCGGAGGATTTCCGGCTGGCGGTGTACCTCGCGGATGTCGAGGGCTTCGCCTACCAGGAGATCGCCGACATCATGAAGACACCCATCGGCACGGTCATGAGCCGTCTGCACCGTGGCAGGCGCATGCTTCGTGAGCTGCTGGCCGAGTACGCACAGGAGCGCGGCATCGCCGCGACAGGGAGCACGAGATGA
PROTEIN sequence
Length: 223
MIATLERPAAGPPASSEGPHVDWLLMNDEAPAASDPRTQFEEQALPFMDQLYAAAMRMTRNPADAADLVQETFVKAFASWKTFTQGTNLKAWLYRILTNTYINTYRKKQREPYQGTIDDLEDWQLGGAESTTATSTRSAEAEAIDRMPASVVKDALQSIPEDFRLAVYLADVEGFAYQEIADIMKTPIGTVMSRLHRGRRMLRELLAEYAQERGIAATGSTR*