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SCNpilot_cont_750_bf_scaffold_7022_7

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 45 / 55 BSCG 47 / 51 MC: 2 ASCG 7 / 38
Location: comp(4834..5697)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 280.0
  • Bit_score: 295
  • Evalue 1.70e-77
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003820440 similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 275.0
  • Bit_score: 332
  • Evalue 5.30e-88
  • rbh
Shikimate dehydrogenase {ECO:0000313|EMBL:KHK98982.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 281.0
  • Bit_score: 336
  • Evalue 3.00e-89

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCTGACGACCGGCATCCGGCTGGAGGTGTGGGGCGACCCGATCTCGCACAGCCGGTCGCCGGAGCTCCACGCCGCCGCCTACCGCGTCCTCGGGCTCGACTGGAGCTACGGTCGGCGTCGCGTCGACGAGGTGGGCTTTCCGCGGGCTCTCGCGGAGCTCGGTCCGGAGTTCCGCGGGCTCTCGCTCACGATGCCCTTGAAGGGGGCGGCATACGCGGCGGCGACCTCCCGAGACCCGTGGGCGGAGGCGACCGGGGCGGTCAACACGCTCCGCATCGCCGGCGACGCGCTGCTCGGCGTCAACACCGACGTCGGCGGACTCGTCCGAGATCTGCGGGAACACGGTGTGGGCGACATCACCGCCGCGCGCCTCGTCGGCGCGGGCGCCACCGCCACGTCGGCGCTCGTGTCGCTGTCGGCGCTCGGCGTGCGCGACATCGACATCGTCGCCCGCCGTCCGGAAGCGGTCGCACCGCTGCGCACGCTGGGCGACCGACTCGGAGCTCAGGTGACCGTCGCGCCGCTCGACGCGTCCGTCCACGAAGAGGTCCCGCTCACGATCGCCGCACTGCCCGGAGGCGCCGCCGTGTCCGCTGCGGCCGCGGACGCCCTCGCCGCCGCGGGGGGCACGCTCTACGACGTCGTGTACGGCCACTGGCCGACCGCGCTCGCGCGAGGGTGGGAGCGGGCCGGGGGTCGCGCGATCCCGGGGATCGGGATGCTTCTCCATCAGGCTCTCCTGCAGGTGCGCGTGTTCGTCTCCGGCGATGCGGAACTCCCGCTCGCTGAGGAAGACGCCGTCCTGGCGGCGATGCGCGCGGTCATCGCGGACGATCACGCGCACAGCGACATGGGAGACTAG
PROTEIN sequence
Length: 288
MLTTGIRLEVWGDPISHSRSPELHAAAYRVLGLDWSYGRRRVDEVGFPRALAELGPEFRGLSLTMPLKGAAYAAATSRDPWAEATGAVNTLRIAGDALLGVNTDVGGLVRDLREHGVGDITAARLVGAGATATSALVSLSALGVRDIDIVARRPEAVAPLRTLGDRLGAQVTVAPLDASVHEEVPLTIAALPGGAAVSAAAADALAAAGGTLYDVVYGHWPTALARGWERAGGRAIPGIGMLLHQALLQVRVFVSGDAELPLAEEDAVLAAMRAVIADDHAHSDMGD*