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SCNpilot_cont_750_bf_scaffold_9911_1

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 45 / 55 BSCG 47 / 51 MC: 2 ASCG 7 / 38
Location: 3..530

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003803AC7 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 175.0
  • Bit_score: 300
  • Evalue 1.00e-78
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 175.0
  • Bit_score: 292
  • Evalue 3.10e-76
xerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 170.0
  • Bit_score: 283
  • Evalue 5.40e-74

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Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 528
GCTCCGGATCCCGAGGACCCGCTCGGCATCCGCGACCGCGCCCTCCTCGAGATGCTCTACGCGACCGGAGCACGCGTGTCGGAGATCGTGCAGCTCGACGTCGACGACGTGGCGCACGGCGACGTCCTGCGTGTCAGGGGGAAGGGGTCGAAGGAGCGCATCGTGCCCATCGGGGTCTTCGCCCGCGAGGCGGTGGACGCGTATCTGACGCGCGTGCGGCCGGATCTGGCGCGGCGCGGGCGGGCGACACCCCGCCTGTTCCTCGGAGCCCGAGGTGCGGCCGTATCGAGGCAGGGCGTGTGGCTCGTGATCCAGAACGCCGCAGCGCGCGCCGAGCTCACGGCGCATGTCTCACCGCACACGCTGCGCCATTCGTTCGCCACCCACCTGATGCAGGGCGGAGCGGACGTCCGCGTCGTGCAGGAGCTGCTCGGCCACGCGTCGGTGGCGACGACCCAGATCTACACGCACGTCAGCGTGGATGCTCTCCGCGACGTCTACGCAACATCGCATCCACGGGCGCGCTGA
PROTEIN sequence
Length: 176
APDPEDPLGIRDRALLEMLYATGARVSEIVQLDVDDVAHGDVLRVRGKGSKERIVPIGVFAREAVDAYLTRVRPDLARRGRATPRLFLGARGAAVSRQGVWLVIQNAAARAELTAHVSPHTLRHSFATHLMQGGADVRVVQELLGHASVATTQIYTHVSVDALRDVYATSHPRAR*