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SCNpilot_cont_750_bf_scaffold_9911_6

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 45 / 55 BSCG 47 / 51 MC: 2 ASCG 7 / 38
Location: 4486..5304

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 278.0
  • Bit_score: 415
  • Evalue 4.80e-113
rsuA; 16S rRNA uridine-516 pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 243.0
  • Bit_score: 396
  • Evalue 8.90e-108
  • rbh
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372E91E similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 262.0
  • Bit_score: 425
  • Evalue 5.70e-116
  • rbh

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGAGCGAGGAGTCCGCGGAGGGCGTGCGCCTGCAGAAGGCCCTCGCCAACGCCGGTGTCGCGTCACGCCGCGTGGTCGAGGACATGATCGTCGCGGGCAGGATCCGCGTGAACGGCACGGTGGTCAGCGAGCTCGGCTCGCGCATCCATCCCGATCGGGACCTCGTGGACGTCGACGGCACCGCCGTGCAGCTCGACCAGAGCCGCCGCTACGTGATGCTCAACAAACCCACCGGTGTGGTCAGCTCGATGCGCGACGAACGCGGACGCGCCGACCTCCGGCAGTTCACACGGGAGTGGCCCGAGCGGCTCTACAACGTCGGGCGCCTGGATGCCGAGACGAGCGGCCTGCTCGTCCTCACGAACGACGGCGAGCTCGCGCACGTGCTGGCGCACCCGTCGTTCGGGGTCACCAAGGTGTACGTCGCGAAGGTCGACGGCCGGGTCACGCCGCAGACGATCGGACGCCTCACGCGCGGCGTCGAGCTCGACGACGGTCCGATCGCGGCGGACAAGGCGCGCCTGCTCGACGTGTCGGGCGGGACGAGCCTGGTCGAGCTCACCCTGCACTCGGGGCGCAACCGGATCGTGCGACGGATGATGGCCGCGGTCGGGCATCCCGTCGTGGAGCTGGTCCGCCGCCAGTTCGGCCCGCTCCACCTGGGAACGCTCCCTGCGGGGCGTGCACGCGAGTTGACTAAGGTGGAACGCGGCGCACTTCTCACCTTGGCCCGTCGTGACAACGATGCGCCCGAGGCATCCGCGCGCCGCGAGGCGGACGACTCGACACCGCCGGGGGCCGATCAGGAGAACCAGTGA
PROTEIN sequence
Length: 273
MSEESAEGVRLQKALANAGVASRRVVEDMIVAGRIRVNGTVVSELGSRIHPDRDLVDVDGTAVQLDQSRRYVMLNKPTGVVSSMRDERGRADLRQFTREWPERLYNVGRLDAETSGLLVLTNDGELAHVLAHPSFGVTKVYVAKVDGRVTPQTIGRLTRGVELDDGPIAADKARLLDVSGGTSLVELTLHSGRNRIVRRMMAAVGHPVVELVRRQFGPLHLGTLPAGRARELTKVERGALLTLARRDNDAPEASARREADDSTPPGADQENQ*