ggKbase home page

SCNpilot_cont_750_bf_scaffold_11022_7

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 29 / 55 BSCG 31 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 5633..6460

Top 3 Functional Annotations

Value Algorithm Source
OmpA-like transmembrane region n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMR4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 196.0
  • Bit_score: 371
  • Evalue 9.90e-100
OmpA-like transmembrane region similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 196.0
  • Bit_score: 371
  • Evalue 3.10e-100
OmpA-like transmembrane region {ECO:0000313|EMBL:ABE62483.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 196.0
  • Bit_score: 371
  • Evalue 1.40e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGCCGAACGATGGATATCCGACGAAAAGGGGGAACCCATCATGAAGAAATTTCTTCTCACGGCCGCGGCGTTTGCTGCCTTCGCCGCACCGGCGCTTGCGGCTGATCTTCCGCCGCGACCCTATACCAAGGCGCCGCCCTATACGCCGCCGCAGGCGATCTACAACTGGACCGGCTTCTACATCGGCGGCCATCTCGGCGGCGCGTTCGGCGGTGGCGACAGTCTGGGCGGGAACGACGGCCGTTTTCTCGGCGGCGTGCAGGGCGGCGCGGATTATCAGTTCGCCAACAATTGGGTGCTCGGCCTCGAAGCCGAATATAGCTGGCTTGCCAGTGCCAATAGCAACCTGGCATTCCCGGGCGGGAGCATCGTGACCGGCGACGACCGCGGCCTCGGTTCGGTGACCGGCCGGCTTGGCTACACCTGGGGGCCGGCGCTGCTATACGCCAAGGGCGGTTATGCATTCCGCGACAGCAAGCTCGGCGTGACCGACGCCGCGGGCGTGCCGCAGGCTTTCGCAACCACCGGCAATCGCGACAACGGTTACACCGTCGGCGCCGGTCTCGAATACATGTTCGCGCCGAACTGGTCCGCCAAGGTGGAGTATCAGTATTACAATTTCGGGTGTAAACTATCGTTTCGGCTGGGGCGGGCCGGCGGCACCCCATTACTGAGATCGCAAGATTGCGATCTCAGGCGGGTCGTGGCTCACGCCGGATCGGATGAAATCAGAAAGGCCGGCTTCGCGCCGGCCTTTCTTTTTTGGGGTGTGCAAGCTCGCAACGCCGTGGCCACGCATCCGCAATCAGATGCGGTCGACCTTTAG
PROTEIN sequence
Length: 276
MAERWISDEKGEPIMKKFLLTAAAFAAFAAPALAADLPPRPYTKAPPYTPPQAIYNWTGFYIGGHLGGAFGGGDSLGGNDGRFLGGVQGGADYQFANNWVLGLEAEYSWLASANSNLAFPGGSIVTGDDRGLGSVTGRLGYTWGPALLYAKGGYAFRDSKLGVTDAAGVPQAFATTGNRDNGYTVGAGLEYMFAPNWSAKVEYQYYNFGCKLSFRLGRAGGTPLLRSQDCDLRRVVAHAGSDEIRKAGFAPAFLFWGVQARNAVATHPQSDAVDL*