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SCNpilot_cont_750_bf_scaffold_5111_6

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

partial RP 37 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 9 / 38
Location: comp(4353..4928)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LHV9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 180.0
  • Bit_score: 165
  • Evalue 5.70e-38
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KFC70509.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 188.0
  • Bit_score: 263
  • Evalue 2.80e-67
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 188.0
  • Bit_score: 158
  • Evalue 2.90e-36

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
TTGTCGCTCGAAGATCTTGAAATGCAGCTGAGGCCGCTGTTTCTGGCGGCGCTCGCCGGCGACGGGGCGGCCTATCGGCGCTTCCTCGATATCATCGGCGAGCGCTTGCGAGGCCATCTGCGCCACATGCTGGCGCGGGCCGGGCGCCGCGAGCCGAGCGAGGTCGAGGACGTGCTGCAGGAGGTGCTGCTGGCGCTGCACCTGTCTCGCCATACCTATGACCCGGCGAGCCCGGTCACGGCCTGGGCCCATGCGATTGCCCGCTACAAGCTGGTCGATCATCTGCGCCGCTCCGGCCGCCATGTCGGCCATCTGCCGCTCGACGAAGAGGCGTTCGGGCTGGCCGACCGGCCGGTCGCAGCGGCTGCGGAGGCGCGGCTCGACCTGGATCGCGCCATGGCGAGCCTGCCCGAGCGAACGCGGGGCCTGATCGACCGGGTCAGGCTGCAGGGGGCCAGCATCGCCGAAGCGGCGGTTGCGGCAGGCATGAGCGAGAACGCCGCGAAGGTCGCGATTCATCGCGGCTTGCAAACCATGGCCAAATTCCTGTCCCGCAGTGGGAGCAAGCCCGGATGA
PROTEIN sequence
Length: 192
LSLEDLEMQLRPLFLAALAGDGAAYRRFLDIIGERLRGHLRHMLARAGRREPSEVEDVLQEVLLALHLSRHTYDPASPVTAWAHAIARYKLVDHLRRSGRHVGHLPLDEEAFGLADRPVAAAAEARLDLDRAMASLPERTRGLIDRVRLQGASIAEAAVAAGMSENAAKVAIHRGLQTMAKFLSRSGSKPG*