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SCNpilot_cont_750_bf_scaffold_5164_7

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

partial RP 37 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 9 / 38
Location: comp(5896..6744)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XK40_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 167.0
  • Bit_score: 158
  • Evalue 7.90e-36
transcriptional regulator, IclR family similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 167.0
  • Bit_score: 158
  • Evalue 2.50e-36
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AGU53237.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 167.0
  • Bit_score: 158
  • Evalue 1.10e-35

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGCCTCGTCGCCGATGAACCGCGCTCCGACATCGTCGGCGAATGACGCAAGCAGTCCCGCACCGTCGCAGGTCATCGACGAGCGTCTGTTCGTGGCCTCCGTCGGGAAGGCGATGAAGGTGCTGGAAGCTTTCGACAAGTCGGCCTCGACGCTCGGGCTTTCGGACATCGCGATCCGGACGGGGCTCGGCCGCAGCGCCTCGCAGCGCTTCATCTACACGCTGGAACGGCTGGGCTATCTCGACCGGGACGAGCAGACCAAGCGCTACAGCCTGTCCCGCAAGGTTTTTCGCTTCGCCCAGAATGCGGTTTCCGCCAATGCAGGGCTTGATGCCGCCTATCCGGCCATGCGTGAGCTCGCCGAGCGGACGCGCGAGACGATTTCCTGGGTCGAGGTCGACGGTGCGGAGATCGTGATCATCGCGACCGTCCCGAGCACCCATATCTCGTCGGTCAACCTGCCGGTGGGCACGCGCTTTCCGGCGCTTTCCTCCCAAAGCCGCGAACGCGGCCGAGATGGTCCGCATCCTGGAGGCCGCGAAGGCGACCGGCTTCGCCGTCACGGAGAAGAACATGGAGCAAGGCTCCATTTCGGTCTCCGCTCCGGTGCACGATCGGGCGGGGCGAGCGATCGGCGCGATCAACCTGTCGACGCTGACGACGCGCTACGATCGGGAGGCCGCGCTGCGCGACCTTGCCCCCCTCGTCGCCCAGGCAGCTCTCCGGACGACCGAGGCCTTGGTCTCCTAAACCTCGGTCAAACCCGTCTCCTTCTTCCAGTGTTCAAGGTCGCCGATCCCCACCGGGTCGGGAGCCTCGGCATGGCCGTGCCCGGGCGCGAATCTTGA
PROTEIN sequence
Length: 283
MASSPMNRAPTSSANDASSPAPSQVIDERLFVASVGKAMKVLEAFDKSASTLGLSDIAIRTGLGRSASQRFIYTLERLGYLDRDEQTKRYSLSRKVFRFAQNAVSANAGLDAAYPAMRELAERTRETISWVEVDGAEIVIIATVPSTHISSVNLPVGTRFPALSSQSRERGRDGPHPGGREGDRLRRHGEEHGARLHFGLRSGARSGGASDRRDQPVDADDALRSGGRAARPCPPRRPGSSPDDRGLGLLNLGQTRLLLPVFKVADPHRVGSLGMAVPGRES*