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SCNpilot_cont_750_bf_scaffold_5692_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(3343..3705)

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W639_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 121.0
  • Bit_score: 213
  • Evalue 1.50e-52
PadR family transcriptional regulator {ECO:0000313|EMBL:EIL94930.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 121.0
  • Bit_score: 213
  • Evalue 2.10e-52
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 119.0
  • Bit_score: 212
  • Evalue 8.10e-53

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGGATGACGGCAGTCAACTGAAGAAGTTCCAGAAGGAGCTGTCCACCGGCACGGTGGCGCTGGTCCTGCTGGCCGTGCTGGCGCAGTCGCGCCAGCCGATGTACGGCTACCAGATCGCCAAGCGGCTGGAGGCGGTGGGCGAGGGCGTGCTCGCCGGCAAGCAGAGCGCGTTGTATCCGGTGCTGCGCAATCTCGAGGCGTCGGGATTGCTGGCCAGCGAGGTCGAGCCTTCGATCAGCGGACCGCCGCGACGCTATTACCGCATCACCCGGCCCGGGCGCGACGCGCTGCGCGACTGGACCGCCGCGTGGATCGCCACCCGCGATTCGGTCGACAACGTCTTGCAAGGAGGGGTTTCATGA
PROTEIN sequence
Length: 121
MDDGSQLKKFQKELSTGTVALVLLAVLAQSRQPMYGYQIAKRLEAVGEGVLAGKQSALYPVLRNLEASGLLASEVEPSISGPPRRYYRITRPGRDALRDWTAAWIATRDSVDNVLQGGVS*