ggKbase home page

SCNpilot_cont_750_bf_scaffold_12153_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(2813..4375)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent outer membrane receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE23_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 520.0
  • Bit_score: 822
  • Evalue 3.10e-235
TonB-dependent outer membrane receptor protein {ECO:0000313|EMBL:EIL97714.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 520.0
  • Bit_score: 822
  • Evalue 4.30e-235
outer membrane cobalamin receptor protein similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 520.0
  • Bit_score: 807
  • Evalue 1.90e-231

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
TGCACTCCGTTCAATCCGTTCAATCTGTTTGATCCGAACTCGATTGCCGCACTGCAGGCAGCTGCCGTTCCGGCGATCAGCAACACCTTCCGGATCCAAAAGATCTACTCGGTTGACGTCAACGGCGGCCTGTTCAACCTGCCTGCCGGTACCGTGCAATTGGCAGCGGGCGCCGACTATCGCAAGGAATACAACAACACCACGGTCGACCCGTTGCTGCTGATCGATCCGGTTTCCCTGAACTGCACGCTGGGCAGCCAGTGCGCTTCGTCCTTGTCGGGCGGCTACAACTCGAAGGAAGTCTACGCCGAGGCGTTCGTGCCGATTCTGAGCAATCTGCCGGGTGTGCAGAGCCTGAACGTCACCATCGGTGATCGCTATTCCAAGTTCAACCTGTATGGCAGCAACAACAGCAAGAAGTTCGCGGTGGAATATCGCCCGATCAACGACCTGCTGTTGCGTGCCACCGTATCGGACGTGTTCCGTGCGCCGACCGTGCTCGATACGTTCGCTGCCGCGGCGAGCGATGCACCCAAGCTCAGCAACGATCCCTGCAACGGCACCACCACCGCCGGCAATCCGGCTTGCGTGGGCGTACCGACCGATGGCAGCTTCACCAACAAGGATGTGGCGTCCGGCCAGCAGATCAAGGGTGTTCTGGCTGGCTCCCAGTACTCGGGTCTACCAATCGGGCCGGAGCGCGGTAAATCCTTCGACTGGGGGTTCGTCTACTCGCCGAGCTATATCCCGGGCCTGTCCGCCAGTGTGGACATGTGGAAGATCTACCTGAACGACACCGTCACCACGATTGGCGCGCAGACGGTACTCAACCTGTGCTACGCCGGTGAAACCAAGTACTGCCCGCTGATCTCGCGTTTCCCGACCGGGAATGTCAACGCCGGCCAGATCAACAGCATCACCGAGCCGACCGGCAACCTGGGTCGCACCGATGCAAGCGGCGTGGATCTGTCGCTGCGCTATAAGCTGCCGCAGTTCCCCTTCGGCAACTTCACGATCGGGGTGGACGGTACCTATCTGTCGCGTTGGGATCAGCAGACGGCCCCTGGCACCACTGCCAACGCGGTTTATAATGACGCCGGCCACTTTATGCCATTCGGCTCGTCGCAAGCCGCGGCCTGCCCGAGCGGCGGTGGCGTGTGCCTATTCCCGCGCTGGCGTGCGCAGGGGTTCCTGAACTGGAACCTGGGTAACTGGGATGCCTCCTGGCGCATGCGCTACATCGGTCGTTTCCAGAACGGCTCGAAGAGCCCGAGCCAGGATACGTTCCCGGGCGGCGTGTGCTATTACGAGGGCAAGCCACAGGGTAATCACTGCAACGCGACCGGTATTGTGTTGAAGTACGGTGCGACGATCTACAACGATGTGTCGATCGGTTACAACATCGAGCCACTCAACACTCGAGTCGACTTCGGCGTGAATAACGTGGCCGACAAGCAGCCGCCGTTCCTGTATGCGAACAACACGCTGAACGCTAACACCGATCCAACCGACTTCGATCTCATCGGTCGCTACTATTGGGCTCGCGTGACGGTCAAGTTCTGA
PROTEIN sequence
Length: 521
CTPFNPFNLFDPNSIAALQAAAVPAISNTFRIQKIYSVDVNGGLFNLPAGTVQLAAGADYRKEYNNTTVDPLLLIDPVSLNCTLGSQCASSLSGGYNSKEVYAEAFVPILSNLPGVQSLNVTIGDRYSKFNLYGSNNSKKFAVEYRPINDLLLRATVSDVFRAPTVLDTFAAAASDAPKLSNDPCNGTTTAGNPACVGVPTDGSFTNKDVASGQQIKGVLAGSQYSGLPIGPERGKSFDWGFVYSPSYIPGLSASVDMWKIYLNDTVTTIGAQTVLNLCYAGETKYCPLISRFPTGNVNAGQINSITEPTGNLGRTDASGVDLSLRYKLPQFPFGNFTIGVDGTYLSRWDQQTAPGTTANAVYNDAGHFMPFGSSQAAACPSGGGVCLFPRWRAQGFLNWNLGNWDASWRMRYIGRFQNGSKSPSQDTFPGGVCYYEGKPQGNHCNATGIVLKYGATIYNDVSIGYNIEPLNTRVDFGVNNVADKQPPFLYANNTLNANTDPTDFDLIGRYYWARVTVKF*