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SCNpilot_cont_750_bf_scaffold_17330_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2288..2743

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003498609 similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 151.0
  • Bit_score: 231
  • Evalue 6.70e-58
transmembrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 152.0
  • Bit_score: 199
  • Evalue 8.90e-49
Putative transmembrane efflux protein {ECO:0000313|EMBL:CCJ49658.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 152.0
  • Bit_score: 199
  • Evalue 4.00e-48

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Taxonomy

Bordetella parapertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCGCTTCGGCATCCGCCTGCCGCTGGCTGCCGGCCTGGCCATGGCGGCGACGGGGTTGGCGCTGTTTGCGCGCGCGCCGCTGGACGGACAGTTCACGGTCGACGTGCTGCCGGCGATGATGCTGTTGGGCCTGGGTGCCGGCATCGCGTTCAACCCGGTACTGCTGGCGGCGATGGGCGACGTCGCGCCGGACCAGTCCGGGCTGGCCTCGGGAGTGGTCAACACGGCCTTCATGATGGGCGGCGCGCTGGGTCTGGCGGTGCTCGCCAGCCTTGCCGCCGCCAGGACGAGCATCCTGACCGACGCCGGAGCCGACACGCTGGCGGCCCTCAACGGGGGATATCACGTGGCATTCCTGGCGGGCGCATGCGCGGCCGCGGCCGCCGCGCTGGCTGGCGCCCTGCTGTTGCGGCCGCAGGGCAGCGCCCACGCCGCCGCTGCCGCCAGCCACTGA
PROTEIN sequence
Length: 152
MRFGIRLPLAAGLAMAATGLALFARAPLDGQFTVDVLPAMMLLGLGAGIAFNPVLLAAMGDVAPDQSGLASGVVNTAFMMGGALGLAVLASLAAARTSILTDAGADTLAALNGGYHVAFLAGACAAAAAALAGALLLRPQGSAHAAAAASH*