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SCNpilot_cont_750_bf_scaffold_18680_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 821..1357

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 178.0
  • Bit_score: 326
  • Evalue 3.30e-86
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 177.0
  • Bit_score: 321
  • Evalue 1.40e-85
  • rbh
Pseudouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFC5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 178.0
  • Bit_score: 326
  • Evalue 2.40e-86
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCTGCTGGCGCTCAACAAGCCGTACGGCGTGCTCTGCCAGTTCACCGACCGCGAAGGCCGCGCCACGCTGGCCGATTACGTCGCGCAAACGGACGTCTATGCGGCTGGACGGCTGGATCGCGACAGTGAAGGTCTGCTGCTGCTCACCGACGACGGCGCACTCGCACACCGGCTCACCGACCCGCGCCACAAGCAGGCCAAGACCTATCTGGCCCAGGTCGAAGGTTGCATCGACGAAGCCGCGCTGGCCGCGCTGCGCCGTGGCGTGAGGTTGAACGACGGCCCGACCCTGCCGGCCGAGGCCGCCTTCGCCGCCGAACCGGACTGGCTGTGGCCGCGCGACCCGCCGGTGCGCTTCCGCCAGGCGATCCCCACCAGCTGGCTCAGCCTCACCCTGCGCGAAGGCCGCAACCGTCAGGTGCGTCGCATGACCGCCGCGGTCGGCTTTCCGACCTTGCGGCTGATCCGCGTGCGCGTCGGCGACCACACGCTGGATGGCCTGGCCCCCGGCGAGTCGCGCGTGCTGACGGTGTAG
PROTEIN sequence
Length: 179
MLLALNKPYGVLCQFTDREGRATLADYVAQTDVYAAGRLDRDSEGLLLLTDDGALAHRLTDPRHKQAKTYLAQVEGCIDEAALAALRRGVRLNDGPTLPAEAAFAAEPDWLWPRDPPVRFRQAIPTSWLSLTLREGRNRQVRRMTAAVGFPTLRLIRVRVGDHTLDGLAPGESRVLTV*