ggKbase home page

SCNpilot_cont_750_bf_scaffold_18768_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(933..3158)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV39_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 751.0
  • Bit_score: 1208
  • Evalue 0.0
  • rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL91080.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 751.0
  • Bit_score: 1208
  • Evalue 0.0
outer membrane receptor protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 751.0
  • Bit_score: 1205
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2226
ATGATTGAACCTTGGACCCCCATCCAGAGTTTCACTTTGAAACGCCTCCCCTCCGGCTTTTGCGCACTTGCGCTCGTGTTGTGTGCCAGCCCCGCGCTGGCCTCCGATCCCACCCACCCAGTGACGCTGTCGCCGGTCTCGGTACACGCCAGCGACACCATGGTCACCGAGACGCCCGCCGTGCAGGTGCGCGTGACGCGCCTGCAACTGCAGCGGCAGAACAGCACCGACAGCGCCGATGCACTGAAGTACGTGCCGAACATGCAGGTGCGCAAGCGCTACATCGGCGATCCGAACGCCGTCATCAGCGGCCGCAACGCCGGCACCCTGCAGAGCGCGCGCAGCCTGGTCTATGCCGACGGGCTGCTGCTCTCCAACCTGATGACCAACGGCTGGGAAGGCGCACCGCGCTGGGGCATGGTCGCGCCCGGCGAGATCGGCGCGGTCGACATCCTGTACGGACCGTATTCCGCGCTGTATCCGGGCAACTCGCTGGGCACCACGGTGCTGATCCACACCGTGCTGCCGCAGCAGTTCACCGCCAGCGTCGACGCGAGGTTCTTCAGCCAGGACTATGCCGACGATTACGGCGCCGGCGGCCACTACGACGGCCACCAGGCCGCGTTCACCCTGGGCGACAAGCGGGGGCGTTTCAGCTGGCTGCTGGAATACAGCCGCCTCGACAACCACGGCCAACCGATGCAGTACGCCACCGCCCGGGCCGGCGGCGATCCGGCGCTCGCGGTGCCGGTGACCGGTGCCACCGCCGACCGCAACCCGAACGGTTCGCCGCGGCTGGTCTACGGCGCCAACAGCATCGAGCACACCGTGCAGGACCAGGCCAAGCTGAAGCTCGGCTTCGACCTCGGCGAGCATGTCGCGGCGCTGGCCACCGTGGGCTGGTGGCACAACCGCGCCGAGGATCGCACCCGCAGCCTGATCCGCGATGCCGACGGCACCCTGGTCAGCGGCGGCGTGATCGACGCGGCCGGCAAAACCTGGACCTTGCCCGCCAGCGGCCTGGCGCCGTCGAATGCGCGCGACACCCACCTGCTGTACGGGCTCAAACTGAACGGCACTTTGGACAACGACTGGCGCTGGACCGCCGTCGCCAGCCGCGGCCCCGGCACCGTGGCGAGCAAGGATGGTTCGGGCTGGGACACGTTCGACCTGCGCAGCTCCGGCCCGCTCGGCGAGCGCCACCTGTTGTACGCCGGCGTGCACGGCGACCGCTACGTGCTGACGACGCGCGTGCGCGATGCCAGCGACTGGCGCAGCGGCGCCGACGGAGCATTGCGCAGCGTCTACGCCGGCCGCACCCAGACCCGCGCCGCCTACCTGCAGGACGTGTGGAGCTTCACCGACACCTGGACGCTGACCCTCGGCGGTCGGCTGGAGCAATGGCGCGCCTACCGCGGCGTGCTCGCCAACGCCGTCGACACGCTGCGCTACGCCGACCGCAAGCGCACCGATTTCTCGCCCAAGGCTGCGCTGACCTGGGACTTCGCACAGGACTGGGAGCTGCGACTGGCCTGGGGCAAGGCGGTGCGCTACCCCACCGTGTCCGAACTGTTCCAGGGCAGCATCTCGGCCGGCGCCATCGTCAACAACAATCCCGCGCTCGCGCCGGAAGTCGACCGCTCCACCGACCTCACCCTGACCCGCCACACGGGCAACGGCCACTGGCGCGTCTCGCTGTACCAGGACCTGATCGCCGATTCGCTGTACACGCAGACCGACATCACCGTCAGCCCCAGCGTGACCAGCGTGCAGAACATCGACCGCATGCGCGGACGCGGCATAGAAGGCGCGTTCGACTTCCACGACGTCTGGCTCGACGGGCTCGACCTGTCCGCCAGCCTCGCCTTCAACGATGCCCGCACGCTGCGCGATCGCCAGTACCCGCTGGCCGAGGGCAAGGTATTTCCGCGCATCCCGAAGCTGCGCGCCAGCGTGTTCGCGGATTACCGGTTCGCGCCACAGTGGGACGCCTCGCTGGGCATCCGCCACTCCGGCCGCCAGTACGGCAGCCTGGACAACAGCGACCACGTCGACAGCTACGGCGCGGTGAGCCGTTTCACCGTCGCCGACGCAAAGCTGCGCTGGAAATTCGCGCCGGCCTGGACTGCCGCGCTGGGCGTGGACAACATCGGCAATACACATTACTGGGTCTACCATCCCTACGCCGGTCGTACCTGGTTCGGCGAGCTGCGCTGGGAGTTGTGA
PROTEIN sequence
Length: 742
MIEPWTPIQSFTLKRLPSGFCALALVLCASPALASDPTHPVTLSPVSVHASDTMVTETPAVQVRVTRLQLQRQNSTDSADALKYVPNMQVRKRYIGDPNAVISGRNAGTLQSARSLVYADGLLLSNLMTNGWEGAPRWGMVAPGEIGAVDILYGPYSALYPGNSLGTTVLIHTVLPQQFTASVDARFFSQDYADDYGAGGHYDGHQAAFTLGDKRGRFSWLLEYSRLDNHGQPMQYATARAGGDPALAVPVTGATADRNPNGSPRLVYGANSIEHTVQDQAKLKLGFDLGEHVAALATVGWWHNRAEDRTRSLIRDADGTLVSGGVIDAAGKTWTLPASGLAPSNARDTHLLYGLKLNGTLDNDWRWTAVASRGPGTVASKDGSGWDTFDLRSSGPLGERHLLYAGVHGDRYVLTTRVRDASDWRSGADGALRSVYAGRTQTRAAYLQDVWSFTDTWTLTLGGRLEQWRAYRGVLANAVDTLRYADRKRTDFSPKAALTWDFAQDWELRLAWGKAVRYPTVSELFQGSISAGAIVNNNPALAPEVDRSTDLTLTRHTGNGHWRVSLYQDLIADSLYTQTDITVSPSVTSVQNIDRMRGRGIEGAFDFHDVWLDGLDLSASLAFNDARTLRDRQYPLAEGKVFPRIPKLRASVFADYRFAPQWDASLGIRHSGRQYGSLDNSDHVDSYGAVSRFTVADAKLRWKFAPAWTAALGVDNIGNTHYWVYHPYAGRTWFGELRWEL*