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SCNpilot_cont_750_bf_scaffold_19428_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3..893

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein IcmF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 295.0
  • Bit_score: 552
  • Evalue 3.40e-154
Type VI secretion protein IcmF {ECO:0000313|EMBL:EIL93076.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 295.0
  • Bit_score: 552
  • Evalue 4.70e-154
type VI secretion protein IcmF; K11891 type VI secretion system protein ImpL similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 294.0
  • Bit_score: 318
  • Evalue 2.00e-84

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
CAGCCGATCGACCAGACCCTGAAGACGCTGGACGACCTCAGCAAGACCTTGCTGACCATGGGCGATTTCAGCAACGCGGCCGGCCAGCCCAACCCGCAGTTGCTGCTGGCCCAGCAGGCTGCGGCGCAACTCCCGCCGCCGGCCTCCAACTGGTTTGCCGCACTCACCGGCAAGAGCCAGGCGCTGGTGGCCAGCGGCACCAAGAGCGCGCTGGACGACCAGTACCAGCAGGCCGTCGGCAAGGACTGCGCCGACTTCACCCGCGGACGCTACCCGTTCTCGCCGTCGAGCAACAACGACATCCCGCTGCAGAACTTCGGCGAGCTGTTCGGCTATGGCGGTCGCTTCGACAGCTTCTACAACCAGACCGCCGGCAAGCTGATCGACGCCAGTGGCCGCAACTGGCAATGGAAGACCGGGCCCGGCGCGATCAGCGGCTCGGCCGGAATGCTGGGTCAGTTGCAGGGCGCCGACCGGATCAAGCAGATGTTCTTCCGCAGCGGCAACCTGCCGGAAGTCGATTTCACCTGGCTCACGCCGGTGCTTGATGCCGGCATCGGCAAGCTGGTGATCGACGTCGACGGGCAGAAATACGAATACCAGCCGGGTGGCGCGACCAACGTCAGCATGAAATGGCCCGGACCGCAGCCGGGCCGCGTCTCCATCTCCGCCTACGACACCGCCGGCAACCTGCTCACCACGTTCGACTATCGCGGCGACTGGGCGTTCTTCCGCGCACTGCAGGCGGCCAACCTGCAGAAGCAGTCCGACCTGCGCTTCGTGGCCAGTTTCAATTTCGGCGGCCACGTGGCGAAGGTGACGCTGCAAGCCAACAACCTGAAGAATCCGTTCCTCAGCAACGCCCTGTCCAGCTTCCGGTGCGGAGGCTGA
PROTEIN sequence
Length: 297
QPIDQTLKTLDDLSKTLLTMGDFSNAAGQPNPQLLLAQQAAAQLPPPASNWFAALTGKSQALVASGTKSALDDQYQQAVGKDCADFTRGRYPFSPSSNNDIPLQNFGELFGYGGRFDSFYNQTAGKLIDASGRNWQWKTGPGAISGSAGMLGQLQGADRIKQMFFRSGNLPEVDFTWLTPVLDAGIGKLVIDVDGQKYEYQPGGATNVSMKWPGPQPGRVSISAYDTAGNLLTTFDYRGDWAFFRALQAANLQKQSDLRFVASFNFGGHVAKVTLQANNLKNPFLSNALSSFRCGG*