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SCNpilot_cont_750_bf_scaffold_26659_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 101..688

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 191.0
  • Bit_score: 287
  • Evalue 1.40e-74
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 191.0
  • Bit_score: 288
  • Evalue 4.60e-75
16S rRNA m(2)G-966 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 191.0
  • Bit_score: 287
  • Evalue 3.20e-75

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGAGTGGCGGGCGAAAACCGTCGCCTGGCCAGGTGCGCATCATCGGCGGCAACCTGCGCAATTCGCGCCTGCGGGTGCCGGAACTGCCCGGCTTGCGGCCGACCCCGGCGCGCGTGCGCGAGACCGTGTTCAATTGGCTGGCGCCGATGATCGCCGGTGCGCGCTGCCTGGACCTGTGCGCCGGCACCGGCGCGCTGGGCATCGAGGCGTATTCGCGCGGCGCAGCCAGCGTGCAGTTCGTCGAGCGCGACGCGCAGGCGGCGCAGGCGCTGCGCGCGAACCTGGCGCGGCTCAAGCTGATGTCCGCGGTGGTCACCACCGCGGAGGCGGCGACTTTCCTGCGCGGTCCGGCGCAGCCTTGCGATCTGGTCTTCCTCGACCCGCCGTTCGCGCTCGACCTGTGGGCACCGTTGGCCGCGCAGTTGGAAGCGGGCGGCTGGCTGGCGGCGCAGGCACTGATCTACGTCGAATCGCCCCGCGCCGGCGTGGCAGGGCTGCCGGCGCACTGGTCGGTGCATCGCGAGGCGCAGGCCGGCGAGGTACGTTTTGCGCTCTATCGGCGTTCGCTTCCGTCAAGGCAACGCTGA
PROTEIN sequence
Length: 196
VSGGRKPSPGQVRIIGGNLRNSRLRVPELPGLRPTPARVRETVFNWLAPMIAGARCLDLCAGTGALGIEAYSRGAASVQFVERDAQAAQALRANLARLKLMSAVVTTAEAATFLRGPAQPCDLVFLDPPFALDLWAPLAAQLEAGGWLAAQALIYVESPRAGVAGLPAHWSVHREAQAGEVRFALYRRSLPSRQR*