ggKbase home page

SCNpilot_cont_750_bf_scaffold_39461_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(822..1067)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WR20_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 49.0
  • Bit_score: 81
  • Evalue 4.60e-13
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 49.0
  • Bit_score: 81
  • Evalue 1.50e-13
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL87793.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 49.0
  • Bit_score: 81
  • Evalue 6.50e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
CAAGGCGTGCCTGCCGGCCTTGCTCGGGCCGGGCTGGCTTCCGGCAGGCCGAAGGCGAACGAATCCATCGACAGGTCATCCCGCCTTCTGCGCCGCGGCAATCGGGTCGAACTGCCGCCGGGCTGGCGCGCGATGACGCACGGCATCCACGCGGCGTATCCCTCGCGCAAGCATCTGCCGATCAAGACGCGGCGCCTGGTGGATTTTCTGGTGCAGGGGTCTGCGGTGCCGGGGGGCCTGCGGTGA
PROTEIN sequence
Length: 82
QGVPAGLARAGLASGRPKANESIDRSSRLLRRGNRVELPPGWRAMTHGIHAAYPSRKHLPIKTRRLVDFLVQGSAVPGGLR*