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SCNpilot_cont_750_bf_scaffold_39982_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 11 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2..343

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 112.0
  • Bit_score: 209
  • Evalue 6.40e-52
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 113.0
  • Bit_score: 226
  • Evalue 1.20e-56
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIL93299.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 113.0
  • Bit_score: 226
  • Evalue 2.30e-56

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
AGCGTGCTCGAGGGCGAGGTCTACGACGTGGCGGTGGACATCCGCCGCGGCTCGCCCACGTTCGGACAATCGGTCGGCGTGATGCTCACCGCCGACAACCACCGCCACTTCTGGATACCGGAAGGTTTCGCGCACGGCTTCTGCGTGGTCTCCGACTTCGCCACCTTCACCTATCAGTGCACCGCGCTGTACGACCCGAAGGCCGACGCCGGCATCCGCTGGAACGATGCGGCGCTGGCCATCGACTGGCCGGTCAGCGCGCCCTTGCTGTCGGACAAGGACGGCAAGACGCCGCTGCTTGCCGATGTGCCGCCGGAGCGGTTGCCGGTCTACGTTTCATGA
PROTEIN sequence
Length: 114
SVLEGEVYDVAVDIRRGSPTFGQSVGVMLTADNHRHFWIPEGFAHGFCVVSDFATFTYQCTALYDPKADAGIRWNDAALAIDWPVSAPLLSDKDGKTPLLADVPPERLPVYVS*