ggKbase home page

SCNpilot_cont_750_bf_scaffold_3831_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(4628..6058)

Top 3 Functional Annotations

Value Algorithm Source
metal transporter n=1 Tax=Sphingomonas elodea RepID=UPI0002631E0C similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 474.0
  • Bit_score: 601
  • Evalue 7.80e-169
Metal transporter {ECO:0000313|EMBL:AIT05224.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 468.0
  • Bit_score: 531
  • Evalue 1.10e-147
rnd efflux system, outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 470.0
  • Bit_score: 355
  • Evalue 3.00e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGATGCGCGTCGCTTTGCTTTCGCTCCCGCTCGTGGTGCTGGTTGCCGGGTGCACTGTCTCGCCGGCGCATCCGGGGACACAGGCGGCGCTGCCGCCCGCACGCCAGTCGCAGACGATTGCCCCTGCAAGTGGCACGGCGCAGCAGGTGGATGTCGGCGCGCCGCCGCTTGCGCAATGGTGGCGTGCGTTCGGCAGCGCCAAGCTCGACGCGTTGGTCGAGACCGCGCTGGCGCATAACGAGGACCTCGCCACCGCCGAGGCTAATCTGCGTCAGGCGCAGGAACAGGCGCGCGCCACCGCGGGCGGGCAGGGGCCGCAGGCCGATCTCAACTATCAGGTGCAGCGCGCCCGCGTGTCGAACGCGTTGCAGACCCCGCTCGCCGATCAATCGATCAACCTCTACACGCTCCACACCGCACAGGTGACGGTGGCCTATCCGCTCGATCTGTTCGGCGAGGGGCGCAATCGCGTCCGCTCGGCGCGCGCGGCGGCGGAGGTGGCGGCGCATCGGCTCGACGCGGCGCGGATCACCGCAATCTCCAATCTGGTGCAGGCGGCGATTCAATATGCCGCGCTCGACGCGCAGGCCGAGGCGACGCGCAAGGCGATCGCCGACAATCGCGCGCTCGTCGCGATGCTCGAACGGCGGCGCGCGCTCGGCGATGTCGGGCTGTCCGATGTCACCGCGCAGCAGACCGTGCTCGCCAATGCCGAGGCGGCGTTGCCGCCGCTGGAGCGACAGCGCGCGCATCAGGCCGGGCTGATCCTCTCGCTGCTCGGCAGGCCCGCCGGGTCGCCGCTGCCGCCGCTGCCGGCGATGACCGAGCTGCATCTGCCCGCCGATCTGCCTGTCGCGCTCCCGTCCGATGTCGTCGCGCACCGCCCCGACGTCCAGGCGGCGGCGGCGCAGATGCGCGGGGCGGCGGCCGATGTCGGTGCGGCAATGGCGGCGCGCCTGCCGTCGATCACGCTCAGCGGGCAGGCGGGGGGCTCGGCGACGCATTTTGCCGATATGTTCGCCAGCGGGAATCCGTTCTTCTCGCTGATCGGCGGGATCACTCAGCCGTTATTTCATTCGGGGCAATTGCTCCACCAGAAGCATGCGGCCGACGCGGCGCTCGATGCGGCCAAGGCGCAATATCGCGCGGCGGCGCTGCAGGCCTTCCTCGATGTCGACGACGCGCTGTCGGGGCTGCGCACCGATGCTGCCGCACTCGACGCGGCGACCCGCGCCGACGACGCCGCCAGCCGCACGCTGGTGATGACGCGGCGGCAGATGGAGTTGGGCGCAGTCGGCAGTTTCGCGCTGCTCAATGCCTCGTCGGCGGCGTCGCAGGCGGCGGTACAGCGCATCCAGGCGACCGCGGCGCGGCTCACCGATACGGTGGCGTTGTTCCAGGCGTGCGGAACGCCCGTTACGGGAAAATAA
PROTEIN sequence
Length: 477
MMRVALLSLPLVVLVAGCTVSPAHPGTQAALPPARQSQTIAPASGTAQQVDVGAPPLAQWWRAFGSAKLDALVETALAHNEDLATAEANLRQAQEQARATAGGQGPQADLNYQVQRARVSNALQTPLADQSINLYTLHTAQVTVAYPLDLFGEGRNRVRSARAAAEVAAHRLDAARITAISNLVQAAIQYAALDAQAEATRKAIADNRALVAMLERRRALGDVGLSDVTAQQTVLANAEAALPPLERQRAHQAGLILSLLGRPAGSPLPPLPAMTELHLPADLPVALPSDVVAHRPDVQAAAAQMRGAAADVGAAMAARLPSITLSGQAGGSATHFADMFASGNPFFSLIGGITQPLFHSGQLLHQKHAADAALDAAKAQYRAAALQAFLDVDDALSGLRTDAAALDAATRADDAASRTLVMTRRQMELGAVGSFALLNASSAASQAAVQRIQATAARLTDTVALFQACGTPVTGK*