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SCNpilot_cont_750_bf_scaffold_12853_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(3..1373)

Top 3 Functional Annotations

Value Algorithm Source
response regulator PleD n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF62 similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 458.0
  • Bit_score: 534
  • Evalue 8.50e-149
Response regulator PleD {ECO:0000313|EMBL:AJP74510.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 458.0
  • Bit_score: 516
  • Evalue 3.40e-143
PleD related family two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 459.0
  • Bit_score: 413
  • Evalue 9.00e-113

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGCAAAGCGTCACGCTGAAGAGTCGCGCGGTCAGATTCGCGTTCTACGCCGGCGGCGTGGCATTCTTCCTGTCGCTGCTCGCCACCGCCAACGGCAATCTTTCGGCGGATTCGTTCGCGCGCGCGCTGATTCCGGCGATCGTCTGCGCGACGATGTGCTGGGCCTCGACCCAGCAGGCGCTCGCCACGACCGCTGAGGCGGTCGACAAGGCGGTCGACCAGCTCGCCGAAGCCGCCGACGGCGCGCTCGACCGGCGCGTGCCCAACGAGATCCGCAGCGCGGTGCCGCAGCTTGCCACCGCGATGGACCGGCTGTTCGGCCAGCTTTCGGACAATATGGAGAATATCCAGCGGCTCGCGCTGTTCGATCCAGTGACCGCGCTGGCCAATCGCACCAATTTCCGCGCCAGCGCCGAACGCGTGCTGGCCGAAGCCGCCGAGCAGCCCGGTGCGCTTTTCTTCATCGATCTCGATCGCTTCAAGAAGGTCAACGACACCCACGGCCACGCCTGTGGCGACATGCTGCTGGCGATGGTCGCGGATCGGCTGCGCGCAGTGGCCGACCGCGCGGTCGCGGTGGTCGATATCGATCGCTACCCGCCGCTGATCGGGCGGCTGGCGGGCGACGAATTCACGATGCTGTTTCCGGTGCTGACCGACCAGCGCGATGCGGGGTGGATCGCCACGCAAGTGCTCGACGCGCTCGCCTCGCCGTTCGCGCTGCCGAGCGGGGAGGTGTCGATCGGCGCGTCGATCGGGATCGCGCTGCGCCCCGATCACGGCTTCACGCTCCACGATCTGATGCGTTCGGCCGATGCCGCGATGTATCACGCCAAATCCGACGGACGCGGGCGGTTCGAATTCTACAGCGAGACGCTGGCGGCGGAACTGGCCGAACGGCTGCGGCTCGATGCCGAGCTGCGCGCGGCGCTCGACAATGACGAATTCATCCTGGTGTTCCAGCCGCAGGTCGCGCTCGCGGCGGGCAAAGTGGTCGCTGCCGAGGCGCTGCTGCGCTGGCAGCATCCGACCGACGGATTGCGACTGCCGGCGACCTTCATCGGCCGTGCCGAAGAGAGCGGGCTGATGATCGAGATCGGCGACTGGGCGATCGGGCGTGTCGCGCGGACGATCGCGCAATGGGCGGCGCTGGGGGTGGAAACGCGGCTGGCGGTCAACATCAGCGCGCGGCAGATCGATCGGGTCGATTTCCTCCTGCGGCTCCATGCCGCGATGCGCGAAGCGGGGGCGCCGGGGCGGCTACTCGAACGAGAAATGAACGAAACCGTCGCGGCGCACGCCCGCACCGATGCGATCGCCGCGATCTCGATGTTGCGTGAGGACGGCGCGAAGATCGCGATCGACGGCTTC
PROTEIN sequence
Length: 457
MQSVTLKSRAVRFAFYAGGVAFFLSLLATANGNLSADSFARALIPAIVCATMCWASTQQALATTAEAVDKAVDQLAEAADGALDRRVPNEIRSAVPQLATAMDRLFGQLSDNMENIQRLALFDPVTALANRTNFRASAERVLAEAAEQPGALFFIDLDRFKKVNDTHGHACGDMLLAMVADRLRAVADRAVAVVDIDRYPPLIGRLAGDEFTMLFPVLTDQRDAGWIATQVLDALASPFALPSGEVSIGASIGIALRPDHGFTLHDLMRSADAAMYHAKSDGRGRFEFYSETLAAELAERLRLDAELRAALDNDEFILVFQPQVALAAGKVVAAEALLRWQHPTDGLRLPATFIGRAEESGLMIEIGDWAIGRVARTIAQWAALGVETRLAVNISARQIDRVDFLLRLHAAMREAGAPGRLLEREMNETVAAHARTDAIAAISMLREDGAKIAIDGF