ggKbase home page

SCNpilot_cont_750_bf_scaffold_10852_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(3..668)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y5X6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 211.0
  • Bit_score: 235
  • Evalue 5.20e-59
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KFG88900.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 212.0
  • Bit_score: 237
  • Evalue 1.90e-59
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 210.0
  • Bit_score: 156
  • Evalue 7.40e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium herbicidovorans → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
GTGATCGATAACCAATCTGCATCTGCTCGGCGCCGCCCCGGCGCGGTCGCGCTGCTCGAACAATTGCGGATCGCGTTGCGTCGCCAGCGGATCGGCGCCGCGGCGTTGGCCAAAAGCGCCGGCGTCGGGGAGGCGACGGCGCGGCGCTGGCTCAACGGGCAGGGGCTGACGCTCGATCGGCTCGATCAGCTATGCGGCATTGCCGGGATCGACATTCGCGATCTGATCGGGGCGGCCGAGGCGGAACTCGCCGCGCAGTTCACGCTGCGGCAGGAACGGATCCTCGCCGCCGATCGCGCGCTCGCCTTTCTGTTCTTCTCGATCCTCAACGGGTGGCAGAAGGAGGATTTCATGCGCGAATTCGGCCTGCCCGCGGCGCGCGTCGAGGCGCATCTGGCGCGGCTCGTCCGGCTCGGGCTGGTCGACGTCAGCGCGAGCGGCCGGGCGCGCGCCTTGACCGCGCGCGCGGTGCGCTGGCGCCGCTGCGGGCCGCTCGCGGCGGCGTTCGAGAACAATATCAAGCAGCTTTACCTGTCGATGGACTTCAGCGCGCCCGACGCGCGTTATGTTTCCGATGTCGTCAAGCTGACCGAGGCGGCGCGCGCGCGGGTCCACGCCCTGTTCGAAGATCTCCGCCGCGACATTCACCGCATCGCCGAGCAAGAT
PROTEIN sequence
Length: 222
VIDNQSASARRRPGAVALLEQLRIALRRQRIGAAALAKSAGVGEATARRWLNGQGLTLDRLDQLCGIAGIDIRDLIGAAEAELAAQFTLRQERILAADRALAFLFFSILNGWQKEDFMREFGLPAARVEAHLARLVRLGLVDVSASGRARALTARAVRWRRCGPLAAAFENNIKQLYLSMDFSAPDARYVSDVVKLTEAARARVHALFEDLRRDIHRIAEQD