ggKbase home page

SCNpilot_cont_750_bf_scaffold_8964_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(280..2676)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFB9_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 806.0
  • Bit_score: 1040
  • Evalue 0.0
  • rbh
TonB-dependent receptor {ECO:0000313|EMBL:KHS46080.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 806.0
  • Bit_score: 1044
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 806.0
  • Bit_score: 1040
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2397
ATGAGAAACCGAGTTTACGCATCGAGCGCCAGCCTGTTCGCGCTGATCACCGCGCTGGGCGCCCCGCCCGCGCTCGCGCAGACCGCGCCCGCCACGCCGCAGCAGGCCGCGCCCGCCCCGGCCGACAATAGCAGCGGCGCCGGGATCGGCGATATCGTGGTGACCGCGCAGAAGCGCGCCGAAAATGTCCAGAACGTGCCGATCGCGATTTCCGCGGTGAGCAGCCAGTTCCTCCAGTCGCGCGACATCAGCTCGATCGACCGGCTCGGCTCGATCGCGCCGAACGTGAAGATCGAGCGCGCGCCTTCGAACAAGACGATCAGCCAGATTTCGATCCGCGGCTCGGTGACGATCAACCCGGCGATCACCTGGGAGCCGGCGGTCGGCCTGTATCTCGACGGCGTCTATATCGCCAAGGCGCAGGGCTCGATCTTCGACGTCGCCGATCTCGAGCGCGTCGAACTGCTGCGCGGCCCGCAAGGCACGCTCTACGGCCGCAATGCGCTCGCCGGGGCGGTCAATCTCATCACCAAAAAGCCGAGCGGCGAATGGGGCGGCTCAGCCGAGATCACTTACGGCAATTACAATTTCTGGCGCGGCAAGGCTGTGCTCGATCTGCCGAAGATCGGCATCTTCTCGGTCAAATTGTCGGGGACGATCCAGCGCCGCGACGGCTTCATCAAGCTGGTGCCCAATCCCTATCCGCAGGCGTTCCTTGCGGGGAAGAACCCGACCGATCGCACCAACGACCTGCAGAGCGAAAGCTTCATGGCGCAAGTGCGCGCGCAGCCGGCGCACAATCTGACGTTCGACTATTCGTTCGATTACAGCCGCTATCACCAGCGGCCGGATTATGCGCAGCTCTATCGCGTCAACCGCAACGGCGATCCGCGCGACATCTTCGATCCGAATTCGCCGTCTTACGGCTTCGTCGGCGCCTTCTTCCCGCTCAATCTCTACACCAACCAGACGCGGCAATCGACCGCCAGCCTCGACGCCAACCCGCTCTACGAGCGGACGCGGACCGAGGGGCATAGCCTGACCGCGACCTGGGATGTCGGGGCGCAGACGACGATCAAGTCGATCACCGGCTTCCGTCAATTGCGCTTCGACGACAATCTCGATCTCGACGGCTCGCCGCTGCCGGTCGCGGCGACCGGGCGGCGGACACGTTATCATGCGTTCAGCCAGGAATTGCAGGTCACCGGAAAGGCATTTCAGGACCGGCTGAACTATGTCGCCGGCCTTTATTACTTCAAGGATTTCGCCGAGACGCTCGGGCCGCAGTCCTTCTTCGGCGGCGCGACCGCATTCGAATCCGACTATGCTTCGCATACCGAAGCTTATGCCGCTTATGCGCAGGCCGATCTGAAGATCGTCGACAAGGTGACGCTGACCGGCGGCATCCGCTATACGCACGAGCGCAAGGATATCCGCCGGCTGCTGATCGCGCAGCCGAACACGCCGCAGGCGACGACGCTGATCAACGTGCCGTTCGGCGGGGTGCCCGATGCGAAGTTCCACGATTTCAGCCCGGCAGTGACGCTCAAATACGAGCCGACCGATCACATCAATCTCTATGCGCGCTATGCCAAGGGCTTCAAATCGGGCGGGTTCAACGGCGAGACCAATATCGTCGGCACCACCGCCTCGCTGCCCGGCTGCGCCGCGCCGGCCGAACTGACCTGCCCGTATAAGGCGGAGACGGTCAACAGCTACGAAGTGGGCATCAAGACCAAGCTGCTCAACAATACGCTGCAGTTCAACGTCGCGGGCTTCCTCGACGATCACAAGAACATCCAGCTATCGATCTTCACCGCCGAAGGTGCGGCGGCGTCGATCGTGCGCAACGCCGCTGCGGCGCGGATCAGCGGGCTGGAGATCGAGGCGATCGCGCGCCCGGCCGATTGGCTGACGTTCAACACCTCGTTCGCCTATCTCCACGCGAAGTATAAGAACTATATCGATTATATCGACGGGGTCGCCACCGACGTGTCGAACAACCGCGCCTTCCCGCACGCGCCGAAATATACTGTCTCGATGGGGGTCGACTGGCGCGTCGCGCAGGGGGATTGGGGCAAGTTCAACCTGATCGCCGACATGAACTTCGTGTCGTCTTACTATACTTTCCCTTATGCTTTGGTGACGGCGAGCCCGTCGGATCAGAATGCCAATAACACCAAGTCGCCGGGTCGCACGATCGTCAACATGCGCGCCTCGCTGGGCGATATCCAGCTCGCCGGCACCAAGGCGGAAATCTCGCTGTGGGTGCGCAACCTCACCAACGAACGCAACCCGCAGAACTTCATCGATTTCGGCCCCGGCTTCGGCGGGCTGACGGTTGCTTACTTCCCCGATCCGCGCACCTTCGGGGTGACGGCGGGCGTGAAGTTCTAA
PROTEIN sequence
Length: 799
MRNRVYASSASLFALITALGAPPALAQTAPATPQQAAPAPADNSSGAGIGDIVVTAQKRAENVQNVPIAISAVSSQFLQSRDISSIDRLGSIAPNVKIERAPSNKTISQISIRGSVTINPAITWEPAVGLYLDGVYIAKAQGSIFDVADLERVELLRGPQGTLYGRNALAGAVNLITKKPSGEWGGSAEITYGNYNFWRGKAVLDLPKIGIFSVKLSGTIQRRDGFIKLVPNPYPQAFLAGKNPTDRTNDLQSESFMAQVRAQPAHNLTFDYSFDYSRYHQRPDYAQLYRVNRNGDPRDIFDPNSPSYGFVGAFFPLNLYTNQTRQSTASLDANPLYERTRTEGHSLTATWDVGAQTTIKSITGFRQLRFDDNLDLDGSPLPVAATGRRTRYHAFSQELQVTGKAFQDRLNYVAGLYYFKDFAETLGPQSFFGGATAFESDYASHTEAYAAYAQADLKIVDKVTLTGGIRYTHERKDIRRLLIAQPNTPQATTLINVPFGGVPDAKFHDFSPAVTLKYEPTDHINLYARYAKGFKSGGFNGETNIVGTTASLPGCAAPAELTCPYKAETVNSYEVGIKTKLLNNTLQFNVAGFLDDHKNIQLSIFTAEGAAASIVRNAAAARISGLEIEAIARPADWLTFNTSFAYLHAKYKNYIDYIDGVATDVSNNRAFPHAPKYTVSMGVDWRVAQGDWGKFNLIADMNFVSSYYTFPYALVTASPSDQNANNTKSPGRTIVNMRASLGDIQLAGTKAEISLWVRNLTNERNPQNFIDFGPGFGGLTVAYFPDPRTFGVTAGVKF*