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SCNpilot_cont_750_bf_scaffold_10355_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(2979..3590)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer TrbD transmembrane protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VXD7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 99.0
  • Bit_score: 172
  • Evalue 3.80e-40
Conjugal transfer protein TrbC {ECO:0000313|EMBL:CEG10294.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 200.0
  • Bit_score: 238
  • Evalue 7.90e-60
putative conjugal transfer TrbD transmembrane protein; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 85.0
  • Bit_score: 165
  • Evalue 2.50e-38

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGAATACACATAATGCGCCTGCGCTGCGCCGTCTGCCCGACAGGTGGCTGATCGCGGCCCTCGCCGCCGCCACCCTTATCCCTGCGACCGCCCATGCCTCTGGATCGGGCATGCCGTGGGAACAGCCGCTGCAACAGATCCTCGAATCCGTGCAAGGCCCGGTCGCCAAGATTGTCGCGGTCATCATCATCATCTCGACCGGTCTGGCGCTGGCCTTCGGCGAAACATCCGGCGGCTTTCGCAAGCTGATCCAGATCGTGTTCGGCCTGTCCATTGCCTTTGCGGCGTCCTCCTTCTTCCTCTCCTTCTTCATGGCGGGGGCCAGCTTCATCGCGCCAAATGGCTTTGTCATTGGCCATGTGGAGGGATTTGAAGTCCCGCTGCATCGCGCGCTGACCGAGCCGATCCTACTGGGCGGCGCGCCGCGCGGGATCGCCATCCTCAACGGCACGCTCGCCGCCGCGATGGGGCTGGGCCTCCAGCAATGGATCGCCGGACTGCTGCTCTGGCTTGCCGGACACAGCCTCGCCGTGTTCGCGGCCAAGCGCGATCCCGATTTCGCGCCCGTCCTCGCGCGCCACCTCCGGCAGAAGGTCTGTCTCTCATGCTGA
PROTEIN sequence
Length: 204
MNTHNAPALRRLPDRWLIAALAAATLIPATAHASGSGMPWEQPLQQILESVQGPVAKIVAVIIIISTGLALAFGETSGGFRKLIQIVFGLSIAFAASSFFLSFFMAGASFIAPNGFVIGHVEGFEVPLHRALTEPILLGGAPRGIAILNGTLAAAMGLGLQQWIAGLLLWLAGHSLAVFAAKRDPDFAPVLARHLRQKVCLSC*