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SCNpilot_cont_750_bf_scaffold_14555_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 1..1545

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 514.0
  • Bit_score: 895
  • Evalue 3.90e-257
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 515.0
  • Bit_score: 824
  • Evalue 1.50e-236
transcription-repair coupling factor n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C4F2F similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 514.0
  • Bit_score: 893
  • Evalue 1.10e-256

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
TTCGGCAAGACCGAGGTGGCGCTGCGCGCGGCGTTCGTCGCGGCAATGGCCGGGATGCAGGTCGCGGTCGTGTGCCCCACCACATTGCTCGCGCGCCAGCATTACCAGAATTTCGTCGCGCGCTTCGAGGGCTTCCCGATCAATATCGGGCGCCTCTCCCGCCTCGTCTCGGCCAATGAGGCGAAAACGACCCGCGAGCGGCTCGCCTCGGGCGATCTCGATATCATCATCGGCACGCATGCGGTGCTGGCGAAGGGGGTGGAGTTCAAGCGGCTCGGGCTCGTCATCGTCGACGAGGAGCAGCGTTTCGGCGTCACCCACAAGGAGCGGTTGAAGGCGCTCAAGAGCGACGTCCACGTCCTCACCCTCACCGCCACCCCGATCCCGCGCACCTTGCAGATGGCGATGTCGGGCCTGCGCGAATTGTCGGTGATCCAGACCCCGCCGGTCGACCGCCTCGCAGTGCGCACCTATGTCATGCCGTGGGATCCGGTGGTGCTGCGCGAGGCGTTGCTGCGCGAACATTATCGCGGCGGGCAGAGCTTCCTCGTCACCCCGCGCATCGCCGATCTCCCCGATATCGAGGAGTATCTGCGCAACGAGGTGCCCGAGATCCGCTATGTCATCGCGCACGGCCAGATGGCGGCGGGCGAGGTCGAGGAGCGCATGTCAGCGTTCTACGACAAGAAGTTCGAGGTGCTTGTCTCCACCTCGATCATCGAGAGCGGGATCGACATCCCTTCCGCCAATACGATGATCGTCAACCGCGCAGATCGCTTCGGGCTGGCGCAGCTCTATCAGCTGCGCGGCCGCGTGGGGCGCTCCAAGACGCGCGCCTATGCCTATCTCGTCACCCCGCCCGAACGGCAGATGACCGATGCGGCGGAAAAGCGTCTCAAGGTATTGTCCGATCTCGATTCGCTCGGCGCCGGTTTCCAGCTCGCCAGCCACGATCTCGATATCCGCGGCGCGGGCAATCTGCTCGGCGACGAACAATCAGGGCATATCAAGGAAGTCGGCTACGAACTTTACCAGTCGATGCTGGAGGAGGCGATCCTCGACGCCAAGGCGGGCGGGCTCGCCGAACGCAAGCGCGATTTCTCGCCGCAGATCACCGTCGACGCGCCGATCCTGATCCCCGAGGACTATGTCCCCGATCTCGATCTGCGCATGGGGCTCTATCGCCGGCTCAACGAGCTCGACGACAAACAGGCGCTGGAGGCGTTCGCCGCCGAGATGATCGACCGTTTCGGCGCGCTTCCCGACGCAACCGAAAATCTCATCCGCGTGATCGAGATCAAGATGAACGCCAAAAAGGCGTGCGTCGCGAAGATGGATATCGGGCCGAAGGGCGCGCTGGTCACCTTCCACGACGATCGTCCGCCCAATGTCGAGGGGCTGCTCGCTTATGTTCAGCGGCTGGGGGCGATCGCCAAGCTCAGGCCGGACTCGAAATTCGCGCTGACGCGTTCATGGGCTGACGCCGATGCGCGGCTCAACGGTGCGCTGCAATTGTCGAAAGGGCTGGCGAAGGCCGCGGGTTGA
PROTEIN sequence
Length: 515
FGKTEVALRAAFVAAMAGMQVAVVCPTTLLARQHYQNFVARFEGFPINIGRLSRLVSANEAKTTRERLASGDLDIIIGTHAVLAKGVEFKRLGLVIVDEEQRFGVTHKERLKALKSDVHVLTLTATPIPRTLQMAMSGLRELSVIQTPPVDRLAVRTYVMPWDPVVLREALLREHYRGGQSFLVTPRIADLPDIEEYLRNEVPEIRYVIAHGQMAAGEVEERMSAFYDKKFEVLVSTSIIESGIDIPSANTMIVNRADRFGLAQLYQLRGRVGRSKTRAYAYLVTPPERQMTDAAEKRLKVLSDLDSLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGYELYQSMLEEAILDAKAGGLAERKRDFSPQITVDAPILIPEDYVPDLDLRMGLYRRLNELDDKQALEAFAAEMIDRFGALPDATENLIRVIEIKMNAKKACVAKMDIGPKGALVTFHDDRPPNVEGLLAYVQRLGAIAKLRPDSKFALTRSWADADARLNGALQLSKGLAKAAG*