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SCNpilot_cont_750_bf_scaffold_16053_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1883..2332)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB40 similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 149.0
  • Bit_score: 206
  • Evalue 2.30e-50
Type I secretion outer membrane , TolC family protein {ECO:0000313|EMBL:EZP56742.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 148.0
  • Bit_score: 205
  • Evalue 4.20e-50
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 126.0
  • Bit_score: 150
  • Evalue 4.70e-34

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
CTGGAGGTGATCCAGTCGTCGGAGGCGGCGGTCAATGCGAATCGGCTCTCGCTGGAGGGCGTGCGGGCCGAGAACAGCGTCGGCAACCGGACGATCCTCGATATCCTCAACGCGGAGCAGGAATTGCTCAACAGCCAGGTGACGCTCGTCACCGCCCGTCGCGACGCTTATGTCGCGGGCTTCGCGCTGCTCGCGGCGATGGGGCGGGCGGAGGCACGGGATCCCGGGCTCGACGGCGGGCCGCTCTACAATCCGGCGGACAATTATAATGCGGTGAAGGGCCGGTTCCTCGATTACGGCACCGGCGCCGCGCCCGTGCCGATCGCCCCGACCACCGCGAAAGTGGCGCCGCAAAACGCCACGGTGACGCGTCCGCTCGGCCCGGAATTCGATACGCCTGTTGACAGGAACGCCCCCTTAACCACAGGTGAGCACGCACCAAACCGCTGA
PROTEIN sequence
Length: 150
LEVIQSSEAAVNANRLSLEGVRAENSVGNRTILDILNAEQELLNSQVTLVTARRDAYVAGFALLAAMGRAEARDPGLDGGPLYNPADNYNAVKGRFLDYGTGAAPVPIAPTTAKVAPQNATVTRPLGPEFDTPVDRNAPLTTGEHAPNR*