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SCNpilot_cont_750_bf_scaffold_16334_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 1..1311

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 331.0
  • Bit_score: 399
  • Evalue 4.40e-108
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 264.0
  • Bit_score: 374
  • Evalue 4.40e-101
  • rbh
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003698A6A similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 328.0
  • Bit_score: 404
  • Evalue 1.70e-109
  • rbh

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
GCTGCCGTCGGTCAGCGCGATATCGACCAGCACCAGATCGATCTCGCGCCCCTCGCCGATGATCCGCACCGCATGGGCGACACGATCGACCGTCGCGACGATCTCATAATCTTCCTCGCTCAGGATATGTTCGGCGTCGAACGCGACGAGCGGCTCATCCTCTACCAGCAGCAGGCGCGAGATCCGCCGCTTCTTACGCCCGAACATCATCGCCACTCTCACAATACGACGGTTACGCCCGCGCCCCTTAACGCGGGTAATCGGCAAGTGGCGCAAAATTTTTCGCGCGCGCCGCGCAAGCGATGTATCAGCCGCTTCATGCCCAGCCGACCGACCGATCCGCGCCCTACCGGCCGCCCTGTCCACCGCATCGCCAAATTGCTCGCGCGCGCCGGCGTCGCCTCCCGGCGCGAGGTCGAGCGGATGATCGCGGAAGGGCGCGTCGCCAAAGATGGGGCGGCGATCGACACCCCCGCGACGTTGCTCGTCTCGCTCGCCGGAGTGACGGTCGACGGCCAGCCGGTCGCAGAGACCCCGCCGCCACGGCTGTTCCTGTTCCACAAGCCCGCCGGCGTCCTCACCACCGAGCGCGATCCGCGCGGGCGGCCGACGACCTATGACCGGTTGCCCAGGGATCTGCCGCGACTCGTCCCCGTCGGGCGGCTCGATTACAATACCGAGGGGCTGCTGCTGCTGACCAATGACGGCGGGCTCAAACGCCAGCTCGAATTGCCCTCGACCGGGGTCGAGCGAGCCTATCGCGCGCGCGCCTTCGGGCAGGTGTCGCAGCCGCAGCTCGAGGCGCTGATCGAGGGGGTCGAGATCGACGGCATCCGCTACGGCTCGATCGACGCCAATATCGAGCGCCGGACCGGCGCCAATCTGTGGATCGAAATGATCCTGACCGAGGGCAAGAACCGCGAGGTGCGCCGCGTGCTCGAACATCTCGGGCTCGAGGTGAACCGGCTGATCCGCACGCGCTACGGCCCCTTCGTGCTCGCCGATCTGCCCGTCGGCGGGGTCGGCGAGGTCAAGCAGCACGATCTGGTCGCCTTCCGCCAGTCGCTCGACCGCAAGGCGCCCGCGCCGGGGGCGATCACGGTGACCGCATCGGGCGGCGGCAGCCGACCGCCCCGCGCCGCCGCCAAACCGCGGCCACATGGCGCGTCGGCGATCGCCAAACCCCGTGAAGAAGCCGCACCGGCAGCGGCGGCGCCGGCGACCCGCGCGCGCCCCGCGCAGCCCCCCAAGCGCAAGGCTGGCTGGGCCAAGCCCAAGCCGCGTTCCGGCCCGGCGAGGCCGCGCAAATGA
PROTEIN sequence
Length: 437
AAVGQRDIDQHQIDLAPLADDPHRMGDTIDRRDDLIIFLAQDMFGVERDERLILYQQQARDPPLLTPEHHRHSHNTTVTPAPLNAGNRQVAQNFSRAPRKRCISRFMPSRPTDPRPTGRPVHRIAKLLARAGVASRREVERMIAEGRVAKDGAAIDTPATLLVSLAGVTVDGQPVAETPPPRLFLFHKPAGVLTTERDPRGRPTTYDRLPRDLPRLVPVGRLDYNTEGLLLLTNDGGLKRQLELPSTGVERAYRARAFGQVSQPQLEALIEGVEIDGIRYGSIDANIERRTGANLWIEMILTEGKNREVRRVLEHLGLEVNRLIRTRYGPFVLADLPVGGVGEVKQHDLVAFRQSLDRKAPAPGAITVTASGGGSRPPRAAAKPRPHGASAIAKPREEAAPAAAAPATRARPAQPPKRKAGWAKPKPRSGPARPRK*