ggKbase home page

SCNpilot_cont_750_bf_scaffold_29473_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(439..1377)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BBA0 similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 308.0
  • Bit_score: 322
  • Evalue 4.60e-85
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD48586.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 310.0
  • Bit_score: 245
  • Evalue 1.30e-61
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 321.0
  • Bit_score: 160
  • Evalue 9.40e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
CAGCGCGCGGTCGCCGGCCCGGCGGCGGGGGTGGCGGCGATCCTGTGCCGCATGGTCGACGAACAGGGGCTCGCCAGCATCACCGTCTCCGAGATCGCCCGGCTGTTGCGCGGCACCGATATGGACCGGCCGGTACAGGCGGCGATGGCGGCCGCGAACCAGCGCGCCGCGCATTTCTGGCAGGCGTTGCCGTTGCTCGCGCAGGAAGACGCGCAAGCGCGCGAGATCTGGGCGGCGTTTGGGCAAGGGGTGCTCGCACTCGCGATGCTCGATCGCAGTGCGGTGGCACGCAACGCGCGCGTCATCCGGCTGACCGCGCGGCTGGCGGACCGTCTTGCGGCGCGCGAGGTCGTGGTGCTGCCGGCGAGCGAAGCCCCTCAGCCGCTCGCGGCATTGGTGCGCCCGGCCGGCAAGCAGCAGATCGTCGACGCGACGATCCGGCTGAGCGGGGAGGGCGGGATCGAGGCGCTCACTCACCGCAAGATCGCCGCCGCCGCCGGGCTGTCGGTCGCATCGACGACCTATTTCTATCCGACCAAGGAGGATATCATCGTCGACGCCGCTTATGACGTCCAGGCGCGTGCGATGAATGCGGTTATAAATCAAAGCGTTGCTCCACCGAGCTTCATGTCGCGTATCACGCTCGACGATCGGCAGGAGGAGCGTGCCGAAATGGCGACGCTGAGCGCCTTCATGGCCGCCGCGGTGCGCAACCCCGAGCTGCTGCCGCTGGCCGAGGTGTTGCGACGGACCCGCGGCATCGACGGCGCGCGCTGGCTCGCGGCGCGCGGCTATCACGCCACCGATCGACTGGACGGAATCGTCTGGGCGGCGGTCACTTCGTTCCTTGCGCAGCATGCATTATTGCTGCCGGCTGCCGAGCGTGTCGCATTTCTCGATGATTTTTCAGATGCTTGGCTCCGCCGGCTGTTCGGCTGA
PROTEIN sequence
Length: 313
QRAVAGPAAGVAAILCRMVDEQGLASITVSEIARLLRGTDMDRPVQAAMAAANQRAAHFWQALPLLAQEDAQAREIWAAFGQGVLALAMLDRSAVARNARVIRLTARLADRLAAREVVVLPASEAPQPLAALVRPAGKQQIVDATIRLSGEGGIEALTHRKIAAAAGLSVASTTYFYPTKEDIIVDAAYDVQARAMNAVINQSVAPPSFMSRITLDDRQEERAEMATLSAFMAAAVRNPELLPLAEVLRRTRGIDGARWLAARGYHATDRLDGIVWAAVTSFLAQHALLLPAAERVAFLDDFSDAWLRRLFG*