ggKbase home page

SCNpilot_cont_750_bf_scaffold_30834_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 3..1304

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028A2C1F similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 410.0
  • Bit_score: 478
  • Evalue 9.00e-132
  • rbh
DNA polymerase {ECO:0000313|EMBL:KJF66067.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 408.0
  • Bit_score: 459
  • Evalue 4.70e-126
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 419.0
  • Bit_score: 321
  • Evalue 4.40e-85
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
GGACGCGCGTCGAAATCCGAGGAAGTTCGACTCGAGTCGGAAGTCTTCGCCGAAGACGCGCCGACCAACTTGCGATCGATCAAATCTCGTCTCGGACACAATTCCTTCAAGTTCGATCTCGCTAAGGGCATCCCCATCCCCAAGCTCGACGACCAAGGAAAAAAGACTGGGAAGTTCAGGCCGGTCGTGCTCGCGTCGGTCGAGAGTCGTATCGTTCAGAGAGCGATTCTCAACGTATTGCTTGAAGTCCCTGCACTGAAGCCATTTATTCGGACATCTTACAGTTTCGGCGGCATCAGGGGTGAACGCGGATCTAAGAAAGACGGTCTCGGTCGCGCCGAATCGGTTTCGGCGGTACCGGCAGCGATCAAGGCGGTCCTCGCCGAGATAGGCGTCGGCGCAAAATTTGTCGCTAGTGCAGATATCAGATCATTCTTTACGCGAATCTCGAAGGAAGCCGTAACGAAGATTATCGCGACTGTAGTCGACGATGACGAGCTCATTGCATTGTTTCGGCAGGCCATCGACGTTGAGTTGTCCAATATGGCACAGCTCAGGGACAAGGCGGTTGATTTCCCTATCGAAGATATCGGCGTTGCTCAGGGCAACTCCCTTTCGCCACTCCTCGGAAACATCATTCTTGCCGACTTTGACCAAGTGATGAACGAAGGTGACTGTCGGTGTATCCGGTATATCGATGATTTTATCATTCTTGCGCCGTCAAAGGCTGCCGCAACTTCGCGCCTACGAAAAGCCGAAGGTTTGCTCAAAGAGCTCGGAATGGAGCTCTCTCCAGAAAAAAGCTCGAAGGGCGGAATATCAATTGATGCTGGGTTTGATTTCCTCGGTATAAATATTTCTCCGGGAGCGGTTCGACCCGGCACGAAGGCTCAAAGCAAGATACTGCGTTCGATACAATCGGCTTTTGAGGAAAGCCTTAAAGCGATGCGCGGTATTCAGCACGGCCAACCTTTCGATCGAGCATGCTCTCTTTCAAACACGTTGAAGAGGGTCGACGGAATGGTCGACGGCTGGGGAAAGCACTACTGGTTCTGCAACGATACGCAGGTTTTCTCAAACCTCGACATCAAAATTAGCGAAAGCATCCGCCGCTATCTCGGTGAATATGCCGCGATCCGCGCAGAGACCCCCGCGACCAGCCACCAGCGAATGCTAGGAGTTTCTGAACTCAGCAGCATCGCCCGCGAGCCCTTCGATTTCCCGGTGACCAGCAAACGGAAGGCAGAGCGCGACAAAAAGTTCGCGGTGAGCCGTTCATCGAGAGAAGCTTTATCTTCTTAG
PROTEIN sequence
Length: 434
GRASKSEEVRLESEVFAEDAPTNLRSIKSRLGHNSFKFDLAKGIPIPKLDDQGKKTGKFRPVVLASVESRIVQRAILNVLLEVPALKPFIRTSYSFGGIRGERGSKKDGLGRAESVSAVPAAIKAVLAEIGVGAKFVASADIRSFFTRISKEAVTKIIATVVDDDELIALFRQAIDVELSNMAQLRDKAVDFPIEDIGVAQGNSLSPLLGNIILADFDQVMNEGDCRCIRYIDDFIILAPSKAAATSRLRKAEGLLKELGMELSPEKSSKGGISIDAGFDFLGINISPGAVRPGTKAQSKILRSIQSAFEESLKAMRGIQHGQPFDRACSLSNTLKRVDGMVDGWGKHYWFCNDTQVFSNLDIKISESIRRYLGEYAAIRAETPATSHQRMLGVSELSSIAREPFDFPVTSKRKAERDKKFAVSRSSREALSS*