ggKbase home page

SCNpilot_cont_750_bf_scaffold_31884_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1..369)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraD n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IN84_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 123.0
  • Bit_score: 214
  • Evalue 6.90e-53
Conjugal transfer protein TraD {ECO:0000313|EMBL:EQB11109.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 123.0
  • Bit_score: 214
  • Evalue 9.60e-53
VirD4/TraD-like protein similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 123.0
  • Bit_score: 210
  • Evalue 3.10e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGAGCATCTTCCGCAACGACACTTTGGGTTCGTGGACCCGCGGCGGACAGGCGATCGTCCACAATGTCCGCATGACGACCCAGGTCTTCTATCAGACCGTGCTCGCCGGGCTGGTGATCTGGATCATGGGCATCGTCTGGTATGCGCTTGAACGGTCGAGCGCCTACGAACGGTTTGTCCTGGTCAAACTGGCTGAGGCCTGGATCAAGGTCGACGCGGCTGGCGGCACCAATGACCCGGTCCGGTTCCACGCGCCCGACGGCAAAATCTATTGGACCTCGGCGGACTGGCTGGTTGCTTCACCGCTAGCAAAAAGAACCATCCAAAGCTTCGAGCTCTACCTGCTCCACGGCGCGCTGATATCGGGG
PROTEIN sequence
Length: 123
MSIFRNDTLGSWTRGGQAIVHNVRMTTQVFYQTVLAGLVIWIMGIVWYALERSSAYERFVLVKLAEAWIKVDAAGGTNDPVRFHAPDGKIYWTSADWLVASPLAKRTIQSFELYLLHGALISG