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SCNpilot_cont_750_bf_scaffold_24233_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Location: comp(407..934)

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis protein CheW n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCT3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 146.0
  • Bit_score: 125
  • Evalue 4.60e-26
Chemotaxis protein CheW {ECO:0000313|EMBL:AHB47784.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 146.0
  • Bit_score: 125
  • Evalue 6.50e-26
CheW protein; K03408 purine-binding chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 167.0
  • Bit_score: 101
  • Evalue 3.80e-19

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGAATCGTCCCGACATGAACCGCCCCGAACTGCAACGACGCACCGGTGCCCCCGTTTCATCGGCGCTCGCGCAGCGCATCGATAGCGTTTCCTCGCTGCTCGTCTTCGTCGTGACCATCAACGGTGAAACGTTCGGCCTGCCGATCGAGCATGTGCGAACGGTGTTTCGCGTCATCGACGTCACCCCCGTGCCTCTGGCCCCGCCTTACGTGGTCGGATTGATCAATCTGCGCGGCAAGATTCTCACCGCCGTCAGCCTGCGCCAAAGACTCGGCCTGCCCACCGATACCGTGAACAACGCTTTCGCCGTATGCCTGAAATACGAGGACGAGGATTTCGCTCTCATCGTCGATACAGTCCGCGACGTCGTTGAAGTGCGGGAAGCCGATCGCCTTCCCGCTTCCCCGCATATCGCCGATGCGCGGGCGCAGCTTACGCTTTCCATCTATCGGCAGGGCGAAACGCTTCTGCCTGTGCTCGACATAGCGAAAACGGTTTTGGCCGGCACAGCGGCGCAAGCCGCCTGA
PROTEIN sequence
Length: 176
MNRPDMNRPELQRRTGAPVSSALAQRIDSVSSLLVFVVTINGETFGLPIEHVRTVFRVIDVTPVPLAPPYVVGLINLRGKILTAVSLRQRLGLPTDTVNNAFAVCLKYEDEDFALIVDTVRDVVEVREADRLPASPHIADARAQLTLSIYRQGETLLPVLDIAKTVLAGTAAQAA*