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SCNpilot_cont_750_bf_scaffold_24492_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Location: 1083..1457

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix motif protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXB5_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 115.0
  • Bit_score: 160
  • Evalue 9.20e-37
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CDP51004.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 123.0
  • Bit_score: 166
  • Evalue 1.80e-38
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 117.0
  • Bit_score: 158
  • Evalue 1.90e-36

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGACGCCCTTCGGCCAGAAAATCCGGGATCTTCGCGAAGAGCGCGGCATCACGCTCAAGACCATGGCCCATGCGCTCGGCGTTTCGCCGGCCTATCTGTCGGCGCTTGAACATGGCCGACGCGGCAAGCCCACCTGGTATCTGATCCAGCGCATCATCGTCTTCTTCAACGTCATCTGGGACGAGGCCGAGGAATTGGAGCGGCTGGCGGATCTCTCCGATCCCAATGTCACGCTGGCAACGGCTGGGATGAATCCCAAGGCGACGGAATTCGCCAATCGCCTCGCCAAGGAAATCGGTCATCTCGACAGCGAGGATCTGGTGCAGTTCCTGGAACTTCTGCGCAAGCGGCTGAAGGCCCGCCCGGGTTCCTGA
PROTEIN sequence
Length: 125
MTPFGQKIRDLREERGITLKTMAHALGVSPAYLSALEHGRRGKPTWYLIQRIIVFFNVIWDEAEELERLADLSDPNVTLATAGMNPKATEFANRLAKEIGHLDSEDLVQFLELLRKRLKARPGS*