ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_750_bf_scaffold_26708_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Location: 3..1025

Top 3 Functional Annotations

Value Algorithm Source
mandelate racemase (EC:5.1.2.2) similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 321.0
  • Bit_score: 195
  • Evalue 3.80e-47
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F6BF32 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 332.0
  • Bit_score: 307
  • Evalue 1.70e-80
  • rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:KCV81336.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlanticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 336.0
  • Bit_score: 318
  • Evalue 1.00e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actibacterium atlanticum → Actibacterium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
GGCGGCTCCGGCGTCGCGGCCGTCGATATGATCGTCGTCGAACTCGTCGACAGTGATGGCGCCAAGGGCCTGGGCTTTTCCTATGTGCTGGGCGGTGGCGGTGAACTGGCTTTGCGCGCCGCTGATGCGCAACTGGCGCGTTTCGTGCGCGGACAACCAGCCACGGCGCCACGGGCCTTGTGGAAGAAGATTTCCCAGAGTTTCAATCGCACGGGCCTTGGCCCCAATCTCGTCGGCCTCGCCGCCGTCGATGTCGCCGCCTGGGATCTCCATGCCCGGCGCCAGAACCTGCCGATGGGCGTCGCCATGGGCGGCCAGATCCGCGCCACGCCGGTCTATGGCAGCGGCGGCTTCAACGTCGTGCAATCGGCGGCTGAGGCAGCCGGTGTCGCCGAGGCGGCCGTGAAACGCGGCCTGGGTGCGGTCAAGCCGCGCATCGCCGGCGTGCGCAAGGACGTCGAGGTGATATCGGCCGTGCGCCAGGCGATCGGCAATCGCGCCCATGTCATGCTCGACGCCAATGAGAAATGCGATCTGGCGGCGGCGCAATGGCTGATGGCTCATGCGCGCGACAACGATGTGTTGTTCGTCGAGGAGCCGCTGCCGGCCAGCGCACTCCATGGCTACAAGGTGCTCAGCCGCATGGCGGGGGCGCCCATCGCCACCGGCGAACATCTGCAAGGCCTGCGCGATTTCACGGCCCTCATCGCCGAGGGCATCGTCAGCGTCGTGCAGCCCGACCTCGCGATGATCGGCGGCCTGACACCGTCTCTCGATCTGGCTGTTCTCGCCGAGGCTTTCGACGTTTCGGTGAGCCCGCACTTCCTGCCGGGGCTCTTCGTCCATCTCGCCGCCGCATCGCCGGCCGTGCGCTGGCTGGAAGAGTTTCCGCTGCTCGAACCGATGTTCGATGGACTGCCAGACATCGCCAAGGACGGCACGATGAGCGCGACGGCAGCGCCCGGCCATGGCCTGTCGCTATCGAAAAAGGCGCTTGCCGTGCAAGCGCCTTTCTCTGGTTGA
PROTEIN sequence
Length: 341
GGSGVAAVDMIVVELVDSDGAKGLGFSYVLGGGGELALRAADAQLARFVRGQPATAPRALWKKISQSFNRTGLGPNLVGLAAVDVAAWDLHARRQNLPMGVAMGGQIRATPVYGSGGFNVVQSAAEAAGVAEAAVKRGLGAVKPRIAGVRKDVEVISAVRQAIGNRAHVMLDANEKCDLAAAQWLMAHARDNDVLFVEEPLPASALHGYKVLSRMAGAPIATGEHLQGLRDFTALIAEGIVSVVQPDLAMIGGLTPSLDLAVLAEAFDVSVSPHFLPGLFVHLAAASPAVRWLEEFPLLEPMFDGLPDIAKDGTMSATAAPGHGLSLSKKALAVQAPFSG*