ggKbase home page

SCNpilot_cont_750_bf_scaffold_33292_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Location: 3..476

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ24_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 153.0
  • Bit_score: 131
  • Evalue 9.80e-28
Putative RNA polymerase sigma factor FecI {ECO:0000313|EMBL:CEJ15505.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 156.0
  • Bit_score: 171
  • Evalue 9.20e-40
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 153.0
  • Bit_score: 131
  • Evalue 3.10e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 474
AGGATCATCGAGGCCCACTATGACGAGTTGCGGCGCTTCACGCGCCGGCGGCTTCATGGCGCGCCGGCGGCGGAGGATCTCGTGCAGGAAGCCTGCCTGCGCTTCACCCGCGTTGAGACGGCAACGCTCGCCAATCCACGGGCCTTTCTCTATCGCATCCTCTCCAATCTCGTTGTCGACCATCAGCGCCAGCAACAACGCGAACGCGCGATTGCCATCGAAACCGAAGCCGATCTCGTCGACGAAACGGCGGATGCGGAACGCGCCATCATTTCGCGTGAGCGGTTGCTTCTGCTGACGCGTGCGGTGGAGGAATTGCCGCCACGGTGTCGCGAGTGCTTCGTGCTGCGCCGCTTCGACGACCTCTCCCAGGAGGAGATTGCCCAGCGCATGGGGATCTCGCGCAACATGGTCGAGAAACATCTGCGTGCGGCCGCCCTGCATTGCATGAAGCGCCTGAGCGAAAACGGCTGA
PROTEIN sequence
Length: 158
RIIEAHYDELRRFTRRRLHGAPAAEDLVQEACLRFTRVETATLANPRAFLYRILSNLVVDHQRQQQRERAIAIETEADLVDETADAERAIISRERLLLLTRAVEELPPRCRECFVLRRFDDLSQEEIAQRMGISRNMVEKHLRAAALHCMKRLSENG*