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SCNpilot_cont_750_bf_scaffold_32818_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Location: comp(2..673)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate-binding periplasmic protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XW34_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 223.0
  • Bit_score: 387
  • Evalue 1.10e-104
  • rbh
C4-dicarboxylate-binding periplasmic protein {ECO:0000313|EMBL:EHH05319.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 223.0
  • Bit_score: 387
  • Evalue 1.50e-104
TRAP dicarboxylate transporter subunit DctP similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 224.0
  • Bit_score: 381
  • Evalue 1.90e-103
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGAATCTCAATCGCCGTACGCTCCTCAAACTCTCCGCCGCCAGCGCCACGCTGGCTGCGCCCGGTTTCGTCAACACAGCCAGCGCTCGCACGCGTAACGTCACCGTCGCGTCGCTGTTCGGCGACGACAAGCCCGAGACGAAGATCTGGGTGAAGATCGGCGAACTGGTCGAGGCGAAACTGCCCGGCCGCTTCAAGTTCAACATCGTCAAGAGCGGTGCACTCGGCGGCGAGAAGGAAGTGGCCGAAGGCGTGCGCCTGGGCTCCGTCCAGGCCAGCCTCTCGACTGTCTCCTCCCTGACCGGTTGGGTGCCGGAATTGCAAATTCTCGATCTGCCTTTCCTGTTCCGCGACGCCGACCACGTGCGCAAAGTGGTGAGCGGCGATACCGGTGCCGGCTTGAAGGATAAACTCGCCGCCCAGCAGTTCGTCGTCGGCGATTTCATCAATTACGGCGCGCGCCATCTCCTGACCAAGGAACCCGTCACCCGGCCGGATCAACTCAAGGGCAAGAAGATCCGCGTCATCCAGAGCCCGCTGCACACCAAATTGTGGAGCGCCTTCGGGACGATCCCGGTCGGCATTCCGATCACCGAAACCTATAACGCGCTGGCGACCGGCGTCGCCGATGCGATGGATCTGACGAAATCCGCCTATGCCGGTTTTAAGCTT
PROTEIN sequence
Length: 224
MNLNRRTLLKLSAASATLAAPGFVNTASARTRNVTVASLFGDDKPETKIWVKIGELVEAKLPGRFKFNIVKSGALGGEKEVAEGVRLGSVQASLSTVSSLTGWVPELQILDLPFLFRDADHVRKVVSGDTGAGLKDKLAAQQFVVGDFINYGARHLLTKEPVTRPDQLKGKKIRVIQSPLHTKLWSAFGTIPVGIPITETYNALATGVADAMDLTKSAYAGFKL