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SCNpilot_cont_750_bf_scaffold_32818_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Location: comp(690..1259)

Top 3 Functional Annotations

Value Algorithm Source
TRAP C4-dicarboxylate transport system permease DctM n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XW33_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 189.0
  • Bit_score: 311
  • Evalue 4.90e-82
ABC transporter permease {ECO:0000313|EMBL:KJF66989.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 189.0
  • Bit_score: 313
  • Evalue 2.40e-82
TRAP C4-dicarboxylate transport system permease DctM similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 189.0
  • Bit_score: 310
  • Evalue 3.40e-82

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
GTCGTCGGCATCCGCATCGGCATCGTCACCACGACGGAAGCGGCGGCACTCGCCGCGCTCTATCCGCTGCTGCTCGCTTTCGGCATGCGGCTTGGCGGCGGCCGCATCCTGGCGAGCTTCACCCAGGCGGCGACGGAGGCAGCGGCCATCGGCCTGTTGATCGGCACAGCCGGCCCGTTCGCCTTCCTGCTCGCCGTTGACAACGTCTCGGGCCTCGTCTCCAATTTCGTCACTGTGCTCGGCGGCAGCGCCTTTGCCGTCACCATGCTGGCGTACGTCATTCTCTTCGCCGTCGGCCTGGTGCTCGATATCGGCGCGGCGATCCTGTTGTTCGGGCCGATCCTGCTGCCGGCTGCCGTCGCCGCCGGCATCGATCCGATCCATTTCGGCGTCATCCTCGTGGTCAATCTGATGATCCACGGGCTGACGCCGCCGCTTGGCATGCTGATCTTCGTGGTCAGCGGCGTCACCCGCGTGCCGGCCACCGCTTTGTTCCGCGCGGTCGTGCCCTATCTGCTGTCTCTGCTCGTTTCCTTAGGCGTCCTGTGCGCCTGGGCCATCATTTTCTAA
PROTEIN sequence
Length: 190
VVGIRIGIVTTTEAAALAALYPLLLAFGMRLGGGRILASFTQAATEAAAIGLLIGTAGPFAFLLAVDNVSGLVSNFVTVLGGSAFAVTMLAYVILFAVGLVLDIGAAILLFGPILLPAAVAAGIDPIHFGVILVVNLMIHGLTPPLGMLIFVVSGVTRVPATALFRAVVPYLLSLLVSLGVLCAWAIIF*