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SCNpilot_cont_750_bf_scaffold_35908_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Location: 3..1169

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, membrane spanning protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UGG2_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 362.0
  • Bit_score: 547
  • Evalue 1.40e-152
  • rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EUC00227.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 362.0
  • Bit_score: 556
  • Evalue 3.30e-155
TRAP C4-dicarboxylate transport system permease DctM similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 362.0
  • Bit_score: 542
  • Evalue 8.40e-152
  • rbh

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
CGTGCCAAGACTTTCGGTGATGGCGACGGACGCCCCGCCGAAAGTCTTGGCACGTTAAATATCTGCCACAAGGATCAAGCGGTGACCGTCACTTCCTCTCCCACTCTCGCGCAACCGGCGGTCTCGGTCCGTGGCCTTGCGACACGGGCGCTCAAAATCATCGAGGCCGGTCTCGGCTACGCGGCCGCGGCGCTGTTGGCCGTGCTGCTCGCCGTCGTTCTGACCAATGTCACGCTGCGTTATGTCTTCGCCACCGGCTTCATCGGCGCCGAAGATCTCGGTATCTGGCTGCACGTCGCCTTGATCGCCGTTGGCGCGCCGCTCAGCCTGAAGAGCGCGCTCGCCATGCGGCTCGATGTCTTCGTGCGGCTGCTGCCGGAGCGGCTGCATCCCACCGCCGAAGGGCTTGCCGATGTTTTCTCGGTGCTCGCCGCTTTCATTCTGCTTTTCGGCGGCAGCGAGATCATCAGCCTGCTCGGCGGCATTTCACCGACACTCGGCCTGCCGGAATGGGTGCGCTTCGCCTTTCTCGGCATCGGCGGCGGATTGATCCTTTTGGTTCTGTCCTTGCAGCGGATCGCGGAAGGCAAAGCGATCGCAATCCTCCTGTCGATCGGCGTGGGTGCGGCGCTTTACTTCGGCCTGCCGCAGCTCTTCATCGACACCCGCCTACCGCCGAGCCTGTTCCTGGCGCTGATCGCCGGCCTCGGTCTGGTGCTCGCCGCGCCTTTGGCCCATGCCTTTCTGGCGGCCGCCTATGTCGCCATTGCTTTCGGCAGCACGTTGCCAGAGCCGGCCATCGTCTCGTCGACCGTCACCGGCATGTCGAAATTCCTGCTGCTCGCCATTCCGTTCTTTCTTTTGGCGGGTGGACTGCTCACCACGTCGGGCGTTGCCAACCAGCTCGTGCGCTTCGCTGCCGCCATGGTCGGCCATCGCCGCGCCGGCCTCGCCCAGACGACGCTGCTGACCAGCGTGCTGTTTTCCGGCGCCTCCGGCTCCTCCGTTGCCAATGCCGCCTTCGGCGCTTCGACGTCTCAGCCTGAACTGGTGAAGCACGGTTATCCGCCGGCACAGGCCGGCGCGATCATTGCCGCCACCTCCGTGCTCGATAACATCATCCCGCCGTCGATCGCCTTTCTCATTCTGGCGACCGCCACCAATCTT
PROTEIN sequence
Length: 389
RAKTFGDGDGRPAESLGTLNICHKDQAVTVTSSPTLAQPAVSVRGLATRALKIIEAGLGYAAAALLAVLLAVVLTNVTLRYVFATGFIGAEDLGIWLHVALIAVGAPLSLKSALAMRLDVFVRLLPERLHPTAEGLADVFSVLAAFILLFGGSEIISLLGGISPTLGLPEWVRFAFLGIGGGLILLVLSLQRIAEGKAIAILLSIGVGAALYFGLPQLFIDTRLPPSLFLALIAGLGLVLAAPLAHAFLAAAYVAIAFGSTLPEPAIVSSTVTGMSKFLLLAIPFFLLAGGLLTTSGVANQLVRFAAAMVGHRRAGLAQTTLLTSVLFSGASGSSVANAAFGASTSQPELVKHGYPPAQAGAIIAATSVLDNIIPPSIAFLILATATNL