ggKbase home page

SCNpilot_cont_750_bf_scaffold_41663_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 3 / 55 BSCG 4 / 51 MC: 1 ASCG 0 / 38
Location: comp(317..604)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1U6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 95.0
  • Bit_score: 166
  • Evalue 9.80e-39
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 95.0
  • Bit_score: 166
  • Evalue 1.40e-38
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 94.0
  • Bit_score: 164
  • Evalue 1.50e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGATCAAGTCCGAACTGGTCCAACGAATTGCCGATAAGAATCCGCATCTCTATCACCGGGACGTGGAGAATATCGTCAATGCGATCCTCGGCGAGATCACCAATGCGCTGTCGCGCGGTGATCGTGTCGAGCTGCGTGGCTTCGGAGCCTTCTCGGTGAAGCGTCGCGACGCCCGCGTCGGCCGCAATCCGCGCACCGGCGAACACGTGTCCGTCGAACAGAAGTCGGTGCCCTTCTTCAAGACGGGCAAGGAAATGCGCGAGCGTCTCAACACCGACGGACACTAG
PROTEIN sequence
Length: 96
MIKSELVQRIADKNPHLYHRDVENIVNAILGEITNALSRGDRVELRGFGAFSVKRRDARVGRNPRTGEHVSVEQKSVPFFKTGKEMRERLNTDGH*