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SCNpilot_cont_750_bf_scaffold_28835_1

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 2 / 55 BSCG 3 / 51 ASCG 0 / 38
Location: 3..332

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein, putative n=2 Tax=Alicycliphilus denitrificans RepID=E8TW99_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 109.0
  • Bit_score: 214
  • Evalue 4.70e-53
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 109.0
  • Bit_score: 214
  • Evalue 1.50e-53
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:AEB86815.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 109.0
  • Bit_score: 214
  • Evalue 6.60e-53

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
CATACCAACGATCACATCCAGGGCGGCGAATCGCTGGTGCGCTGGGTGCAGGAAGAGGCCACGACCCGCCTGGCCCGCTTTCGCGAGCATGTGACGCGCGTGGAGGTGTTCCTGTCCGACGTGGACGGCGGCAAGTCCGGCGTGGCCGACAAGCGCTGCGTGATCGAGGCCCGCCCCGCCGGCCGCCAGCCCGTGGCCGCCCATGCCGAGGCGCCCAAGGTGGCCGATGCCTTCGCCGCCGCAGCCGACAAGCTGCTGCGCTCGCTGGGCGACGACATCGCGCGCGCCAAGGACCGCCAGGGGCGCGAGACCATCCGCACGGCAGAATAA
PROTEIN sequence
Length: 110
HTNDHIQGGESLVRWVQEEATTRLARFREHVTRVEVFLSDVDGGKSGVADKRCVIEARPAGRQPVAAHAEAPKVADAFAAAADKLLRSLGDDIARAKDRQGRETIRTAE*