ggKbase home page

SCNpilot_expt_500_p_scaffold_3548_8

Organism: SCNPILOT_EXPT_500_P_Alphaproteobacteria_novel_39_47

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(6536..7450)

Top 3 Functional Annotations

Value Algorithm Source
Redox-sensitive transcriptional activator id=3924194 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 306.0
  • Bit_score: 243
  • Evalue 2.60e-61
Redox-sensitive transcriptional activator {ECO:0000313|EMBL:EKE09011.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 306.0
  • Bit_score: 243
  • Evalue 3.70e-61
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 300.0
  • Bit_score: 193
  • Evalue 9.80e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 915
ATGGATTTAGAGAAGCTTCGGATATTTTATCAAGTTGCAAAGCATGGAAGTATTTCAGCTGCAGCAGCAAAGTTGAGAATTGCTCAATCAGCCGTAAGTCGCTCAATTTCAATGTTAGAGGAAGAGTTAAATACCCAGCTATTTATAAGGCTAGGGGGAGCTAAAGGTGTTATTCCATCAGACTCAGGGCAAATATTGTTAAATTCTGCCAAAAAAATATTTGACCTTGAAAATTTAGCGACAATAGAAATTGAAGACTTTAATAAGGAGCCAGCGGGAACACTGAAAATCATTACAAGTTTAGGAACAATTAATTTCTGGCTTATGGAAATTTTGCCCGGTTTTCTTAAGCAATATCCTAAATTTAATTTTATCCTTGAAGGATATAATGATGTGATGATTGAATTTGAAATGGCTGATGCGGATGTTGCAATAGGGCCTTTGATAGCAAACACACCCGATTTAATTCAAGAATATTTGATGTCTTATCCTTTAAAATTATATGCAAGTCATGAATATATCAAAAATTTTGGCTTACCAAAAAATGTTAAGGATCTTGACAATCATCGAATCATTATATTTTCAACATTAAGAAAAAGCTTTTTAGGAGATGTGGATTGGCACCTCAATTTGGGATGCGCTCCAGGTTTTGTAAGAAAGCCTTTCTTACAAGTTAATTCTAGCCTTGCATTGACAAAGGCCGCAGAACAAGGTCTTGGAATTATATCAATGAATCCTCACTTCCCTGGAATAGAAAAACTTGTTGAGATTTTGCCTGAGATTAACGAACATTGGGTTGATATTTATTATTCTTATAATCGCAGCCTTAAAACCTCGAAACGGATTAAAGCGTTTCAAGAATATTTAATTCAAAATATTTTAATGAGTGGTTATTCTAGAAGAGGTGTGCGCTAA
PROTEIN sequence
Length: 305
MDLEKLRIFYQVAKHGSISAAAAKLRIAQSAVSRSISMLEEELNTQLFIRLGGAKGVIPSDSGQILLNSAKKIFDLENLATIEIEDFNKEPAGTLKIITSLGTINFWLMEILPGFLKQYPKFNFILEGYNDVMIEFEMADADVAIGPLIANTPDLIQEYLMSYPLKLYASHEYIKNFGLPKNVKDLDNHRIIIFSTLRKSFLGDVDWHLNLGCAPGFVRKPFLQVNSSLALTKAAEQGLGIISMNPHFPGIEKLVEILPEINEHWVDIYYSYNRSLKTSKRIKAFQEYLIQNILMSGYSRRGVR*