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SCNpilot_expt_500_p_scaffold_42606_1

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(3..1289)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer coupling protein TraG n=1 Tax=Pseudomonas aeruginosa JJ692 RepID=U9PMG1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 429.0
  • Bit_score: 849
  • Evalue 1.10e-243
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 429.0
  • Bit_score: 847
  • Evalue 1.80e-243
TRAG family protein {ECO:0000313|EMBL:ACL72974.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 429.0
  • Bit_score: 847
  • Evalue 7.80e-243

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Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATCGCCGGCGTGTGGGGCGCCACACAATGGACAGCAGCGGCCCTTGGCTATCAACTACGCCTTGGCTCGCCCTGGTTTGACCTTCTCGGCACACCGATCTACCACCCGTGGAAGCTGTTTGAGTGGTGGTTCTTCTTCGGGGCCTATGCACCGGAGGTATTCGACGCCGGCGGCGCCATTGCCGGCGCCAGCGGCATGGTCGCCGTGGGCGTTGCCATCGCCATGTCGGTCTGGCGCTCGCGCCAAGCTCGCCTCGTCACCACCTACGGCTCTGCGCGCTGGGCTAACGCGCAGGACATTCGCAAGGCGGGCCTCACGCAACCGGCCGGCGTGTTCCTCGGCCAGCACGACCGCCAGTACCTGCGGCATGAAGGCCCGGAACATGTCCTGACCTTCGCGCCTACGCGCTCGGGCAAGGGCGTCGGCCTCGTGGTGCCGACGCTGCTTTCCTGGCCTGCCTCTGCCGTCATCCACGACATCAAGGGCGAGAACTGGCAGATCACCGCAGGCTGGCGCTCGCGGTTCTCGCATTGCTTGCTGTTCAACCCGACAGATGCGAACTCGGCGGCCTACAACCCACTTCTGGAGGTACGGCGCGGTGCGCATGAGGTGCGCGACGTGCAGAACATTGCCGACATTCTGGTCGATCCCGAAGGTGCGCTGGAGAAGCGCAACCATTGGGAAAAGACCAGCCACGCGCTGCTGGTCGGGGCCATTCTGCATGTGCTCTACGCCGGCGAAGACAAGACGCTGCGCGGCGTCGCCAACTTCCTCTCCGACCCGGCTAGCCCGTTCGAGCTGACCTTGCACCGGATGATGACCACGCCGCACCTCGTGAACGAGGAAGGTAGTGGCCCGCATCCCGTGGTGGCATCCGCCGCACGCGAAGTTCTCAACAAGAGCGACAACGAACGCTCGGGCGTGTTGAGCACGGCCATGTCGTTCCTCGGCCTGTACCGCGATCCCACGGTGGCCGAAGTCACCTCGCGCTGCGACTGGCGCATCGCCGACCTGATCGCGGCCGAGCATCCCGTGTCGCTGTATCTGGTGGTGCCGCCTTCGGACATATCGCGGACGAAGCCGCTCATTCGTCTGATCCTCAACCAGATCGGGCGGCACCTCACCGAATCGCTGGATGGTTCCGATGGCATCGCGCGCCGCCACAAGCTGCTGCTGATGCTCGATGAGTTCCCTGCGCTGGGGCGCCTGGACTTCTTCGAGACGGCCCTTGCCTTCATGGCGGGCTACGGCATCCGCAGCTTCCTCATCGCGCAGTCGCTCAACCAG
PROTEIN sequence
Length: 429
IAGVWGATQWTAAALGYQLRLGSPWFDLLGTPIYHPWKLFEWWFFFGAYAPEVFDAGGAIAGASGMVAVGVAIAMSVWRSRQARLVTTYGSARWANAQDIRKAGLTQPAGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDANSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALEKRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPASPFELTLHRMMTTPHLVNEEGSGPHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRHLTESLDGSDGIARRHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQ