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SCNpilot_expt_500_p_scaffold_6863_4

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: comp(5970..6197)

Top 3 Functional Annotations

Value Algorithm Source
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKN0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 75.0
  • Bit_score: 131
  • Evalue 4.70e-28
RND transporter {ECO:0000313|EMBL:KIO48129.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 75.0
  • Bit_score: 131
  • Evalue 5.10e-28
acriflavin resistance protein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 59.0
  • Bit_score: 84
  • Evalue 2.10e-14

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
ATGACTGCGGCGGCCATGATCATGGGCATGCTCCCGATGGCGATGGGAGGATCCACCAATGCGCCGCTGGGCCGTGCGGTCATTGGCGGCCTGACGTTTGCAACGATATATACCCTGTTCTTTGTCCCGGCTGTATATGCCATCATGTATTACGCACGCAGCGTTCCTAAAGACCAGGAACCCATCCCTGGCCACAAGGAAATCGCTTCACAACATGGAAATGCCTGA
PROTEIN sequence
Length: 76
MTAAAMIMGMLPMAMGGSTNAPLGRAVIGGLTFATIYTLFFVPAVYAIMYYARSVPKDQEPIPGHKEIASQHGNA*