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SCNpilot_expt_500_p_scaffold_1382_8

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: 5655..6116

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding domain-containing protein id=12493929 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 320
  • Evalue 8.50e-85
  • rbh
Pf11948 family protein {ECO:0000313|EMBL:ESA34285.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 144.0
  • Bit_score: 175
  • Evalue 4.80e-41
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 154.0
  • Bit_score: 165
  • Evalue 1.90e-38

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Taxonomy

Leptolyngbya sp. Heron Island J → Leptolyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGGCAGACTTCTGGTGGCCGGCGCGCTTGCAGTCGCCGCCTGCTTCACGCTTGTTTCGGGTTTCCATAAGCCGAGCGGCCACGCGGCCACGGTTTCGCACGACGTTTCGCCGGCGGGACAGGACGCCAGCGATGCCGTCCTCGAACACGCCTTCGCGCATCGCATCGGCAAGCTGCAGGTGGCCGGGCAGGGCACGGTGGTGAAGCGGCTGCCGGATGACACCCATGGCAGCCGGCATCAACGTTTCATCCTGCGGCTGGCCTCCGGGCGTACGCTGCTGGTGGCGCACAACATCGATCTGGCCGGGCGCGTCGAGGCGTTGCAAGTAGGGGATACGGTGGCCTTTTACGGCGAGTACGAATGGAACCCGAAGGGCGGCGTGATCCACTGGACGCACCACGATCCGCAGGGACGCCATGTACCGGGGTGGATCAAACACGGCGGTCAGGTTTACCAGTAG
PROTEIN sequence
Length: 154
MGRLLVAGALAVAACFTLVSGFHKPSGHAATVSHDVSPAGQDASDAVLEHAFAHRIGKLQVAGQGTVVKRLPDDTHGSRHQRFILRLASGRTLLVAHNIDLAGRVEALQVGDTVAFYGEYEWNPKGGVIHWTHHDPQGRHVPGWIKHGGQVYQ*