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SCNpilot_expt_500_p_scaffold_7265_1

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 6 ASCG 11 / 38 MC: 2
Location: 2..607

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide ABC transporter ATP-binding protein LptB; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 201.0
  • Bit_score: 319
  • Evalue 1.00e-84
Lipopolysaccharide ABC transporter, ATP-binding protein LptB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 201.0
  • Bit_score: 319
  • Evalue 3.30e-84
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB07908.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 201.0
  • Bit_score: 359
  • Evalue 3.00e-96

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GCAGGCAAGACCACGGTGTTCACCATGATCATGGGCCTGGTCAAACCCGATGCCGGAAAAATCCTGCTCGATGGCAATGATATCACCCGTCTGCCGCTGTTCCAGCGCGGACAGCTGGGCATCGGTTATCTGCCGCAGGAACCCTCGATCTTTCGTGGGCTGACAGTTACCGGCAATATCATGGCCGTTCTGGAAAACCATGTGCGCGGCCGAGCCGAGCGCAAAAGGCGCCTCGAGGCGCTGCTCGAAGAGTTTTCCATCACCCATCTGGCCAAGTCCAATGCGCTGGCGCTGTCCGGCGGTGAGCGTAGGCGTGTCGAGATCGCCCGGGCGCTTGCCGCCGATCCGGTGTTCATGCTGCTGGACGAGCCCTTTGCCGGTGTCGATCCCATAGCGGTCGCCGAGGTCAAGGGGTTGGTGCGCCAGCTCACCCAGCGCGGCATCGGCGTTTTGATCACCGACCACGCCGTGCGCGAAACGCTTGGGCTCGTCGAGCGGGCCTATCTGATCCATGGCGGCAAGGTGATGATCCAGGGACGCCCCGAGACCATCACCGCAGACCCCGAAGCCCGCCGGGTCTATCTGGGCGACAGTTTTTCCATTTAG
PROTEIN sequence
Length: 202
AGKTTVFTMIMGLVKPDAGKILLDGNDITRLPLFQRGQLGIGYLPQEPSIFRGLTVTGNIMAVLENHVRGRAERKRRLEALLEEFSITHLAKSNALALSGGERRRVEIARALAADPVFMLLDEPFAGVDPIAVAEVKGLVRQLTQRGIGVLITDHAVRETLGLVERAYLIHGGKVMIQGRPETITADPEARRVYLGDSFSI*