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SCNpilot_expt_500_p_scaffold_7265_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 6 ASCG 11 / 38 MC: 2
Location: 721..2229

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L4_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 498.0
  • Bit_score: 644
  • Evalue 1.10e-181
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 502.0
  • Bit_score: 855
  • Evalue 3.40e-245
RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 498.0
  • Bit_score: 644
  • Evalue 3.50e-182
  • rbh

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGGCGCTTTCGCCACGGCTGGAATTCCGCCAGTCCCAGTCGCTGACATTGACACCACAGCTTATGCAGTCGATCCGGCTGCTGCAGCTCAGCCATCTCGAGCTCAACGACTTCGTTGATGCCGAGCTTCTGCGCAATCCGCTGCTTGAGCGCGAAGAGGGAGGCGGCGCCGATGATGCCGAGCCCACTGAGCCGGCCGAGCGCGCCACCGAACTCAGTGCTTATGAAGACACCGTGGCGCAAGGCGACCGGATCAAAAGCGCCGACCAGATCGCCGAAGGTTATGACACCGCGGTCGAGAACGTCTTTCCCGACCAGGCGCCGCAGGAGCTGAGCCAGGGCAGCAGCCCCGACCGCAATGGCAGTTTCGAGGGCGGGGAGGCGCCCGATATCGATCAGTTCGTCGCCTCGCGGCCGCGGCTTTCCGACCATCTCGAGGCGCAGGCCCATATGCTGCTGCGCAATCCGGCGGACAGGCTGATCGCTCTGCATCTGATCGACGGGCTCAACGAGGCCGGTTACCTCACTGTCGAGTTGCAGGCGGTGGCGGATCTGCTTGGTGCCGAGGTCGAAGATGTCGAGGCGGTGCTGGGGGTGCTGCAAAGCTGCGATCCGCTCGGCATGTTTGCGCGCAGCGTGCCCGAATGCCTCGCGATCCAATTGCGTGAGCGCGATCGACTGGACCCGATGATGCAGCGCCTGCTCGACAATCTCACACTGCTCGCCGACCACAATATGCCGGCTTTGCTCAAAGCCGTGGGCTGCGACCGCGAAGATCTGGCCGACATGCTGGGCGAAATCCGCCAGCTCGACCCCAAGCCGGGGCTGGCCTTCGACAGCGCCCCGATCGAGGCGATAGTGCCCGACGTGTTCGTGCGGTCGGGGCCGGATGGAGGCTGGCAGGTGGAGCTCAATAGCGACATTCTTCCACGCGTTCTGGTGAACCGGGTCTACTACGCCACCGTCACCAAGAAGACGCGGGACAGTGCCGAAAAGACCTTCCTCTCAGATTGCCTGGCGACCGCAAATTGGTTGACCAAAAGCCTCGACCAGCGCGCCCAGACCATCACCAAGGTCGCCGCCGAAATCGTCCGGCAGCAGGACGGCTTTTTGACCCACGGGGTCGCCCATCTCAAGCCGATGACGCTGAAAATGGTGGCCGAAGCCATCGAGATGCACGAGTCTACCGTCTCTCGCGTCACCGCGCAAAAATACATTGCGACGCCACGTGGTCTCTACGAAATGAAGTATTTCTTCACCACCGCCATTGCCTCGAGCGATGGTGGCAGCGAGCACTCGGCCGAAGCCGTGCGCCACCGCATTAGGCAGTTGATCGATGCAGAAGCGGCGACGGACATCCTCTCGGACGACACCATCGCCGAAATCTTGCGCAAGGAGCAGGGGATCGACGTGGCGCGTCGGACCGTCGCCAAATATCGCGAGGGCATGAACATTCCCTCCTCGGTCATCCGTCGGCGACAGAAGAAGGAACTGGACCGCTCGGCCTGA
PROTEIN sequence
Length: 503
MALSPRLEFRQSQSLTLTPQLMQSIRLLQLSHLELNDFVDAELLRNPLLEREEGGGADDAEPTEPAERATELSAYEDTVAQGDRIKSADQIAEGYDTAVENVFPDQAPQELSQGSSPDRNGSFEGGEAPDIDQFVASRPRLSDHLEAQAHMLLRNPADRLIALHLIDGLNEAGYLTVELQAVADLLGAEVEDVEAVLGVLQSCDPLGMFARSVPECLAIQLRERDRLDPMMQRLLDNLTLLADHNMPALLKAVGCDREDLADMLGEIRQLDPKPGLAFDSAPIEAIVPDVFVRSGPDGGWQVELNSDILPRVLVNRVYYATVTKKTRDSAEKTFLSDCLATANWLTKSLDQRAQTITKVAAEIVRQQDGFLTHGVAHLKPMTLKMVAEAIEMHESTVSRVTAQKYIATPRGLYEMKYFFTTAIASSDGGSEHSAEAVRHRIRQLIDAEAATDILSDDTIAEILRKEQGIDVARRTVAKYREGMNIPSSVIRRRQKKELDRSA*