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SCNpilot_expt_500_p_scaffold_11785_4

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 6 ASCG 11 / 38 MC: 2
Location: 3492..3935

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003763C88 similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 148.0
  • Bit_score: 208
  • Evalue 3.50e-51
ABC transporter permease {ECO:0000313|EMBL:KEA07778.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 148.0
  • Bit_score: 191
  • Evalue 1.10e-45
binding-protein-dependent transporter inner membrane component family protein 4; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 148.0
  • Bit_score: 169
  • Evalue 7.40e-40

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGCTTTCCTTCCTGTTCAGGCGCCTGGTGCAGTCGGCCTTCGTGCTGCTTGTCGTCGCGCTGCTGTCCTTCATCATGTTCCGCTATCTGGGCGACCCGGTCGCGCAGCTGGTGAATGAAGATGCCACCTATGCCGACCGCCTGGCGCTCCGAAACCAGATGGGGCTCGACGAGCCGATCTGGGTGCAGTTCGCCCATTTCGTCGGCCGCGTCCTGCAGGGCAATTTCGGCCTTTCCTATCAGATGGGCCAGCCGGTTTCCCGCCTCCTGGCCGACCGCCTGCCGGCCTCGATCGAACTGAGCCTCGTCGCCTTCGGCATCTCGCTGGTGCTCGGCATTCCCATGGGCATCTATGCCAGCCTCAAGCCCAACAGCTTTGGCGCTCGCGCCATGATGATCCTGTCGCTGGTCGGCATTTCCTTGCCCACCTTCTTCATTGGCATC
PROTEIN sequence
Length: 148
MLSFLFRRLVQSAFVLLVVALLSFIMFRYLGDPVAQLVNEDATYADRLALRNQMGLDEPIWVQFAHFVGRVLQGNFGLSYQMGQPVSRLLADRLPASIELSLVAFGISLVLGIPMGIYASLKPNSFGARAMMILSLVGISLPTFFIGI