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SCNpilot_expt_500_p_scaffold_23688_3

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 15 / 55 BSCG 19 / 51 ASCG 5 / 38 MC: 1
Location: 1190..1606

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 138.0
  • Bit_score: 180
  • Evalue 2.30e-42
Ribonuclease VapC n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KK68_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 138.0
  • Bit_score: 180
  • Evalue 1.60e-42
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 137.0
  • Bit_score: 129
  • Evalue 6.10e-28

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Taxonomy

Microbacterium maritypicum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 417
TTGCCGACCAGCGCTGACTGGCTGCTCGACACCAGCGCGGCGATCGCGCTGGTGGTGGAAGACCACGCCCAGCACGTCGCCGTCACGCAGTTCTGCCGTAGCGCAGTGCTCGGCCTCTCGGGACACGCGATGCTCGAGGTGTACTCGGTACTGACGCGGCTGCCCGGCGCTGCGCGCGTCACCCCGACCAGCGCTGCACGCATCATCGCACAGGAGTTCCCCGCATCCGTGCCGCTGGGCCCAAAGGACGCGTTGTCTGCCGTCTCGGTGCTCGCCCACGCGGGCGTCGCCGGCGGCGCGGTCTACGACGGCCTCGTCGGGCTTGCTGCCCGCAGCGCGGGCGTGACGCTGGTGACGTGCGACCGGCGCGCTACACCGACGTACGCCGCGCTCGGCGTCGACATTCACCTGCTGTGA
PROTEIN sequence
Length: 139
LPTSADWLLDTSAAIALVVEDHAQHVAVTQFCRSAVLGLSGHAMLEVYSVLTRLPGAARVTPTSAARIIAQEFPASVPLGPKDALSAVSVLAHAGVAGGAVYDGLVGLAARSAGVTLVTCDRRATPTYAALGVDIHLL*