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SCNpilot_expt_500_p_scaffold_29208_2

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 15 / 55 BSCG 19 / 51 ASCG 5 / 38 MC: 1
Location: comp(284..943)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=2 Tax=Microbacterium barkeri RepID=UPI00031DF249 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 219.0
  • Bit_score: 360
  • Evalue 1.10e-96
  • rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC58549.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 219.0
  • Bit_score: 375
  • Evalue 5.80e-101
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 218.0
  • Bit_score: 304
  • Evalue 3.70e-80
  • rbh

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGGGTGATGCCGTGCGGGTCGTGATCGTCGACGACCACTCGATCTTCCGGTCGGGGCTGCGCAGCGACCTCGACGAGACCGTCGTCGTCGCGGGCGAAGCCGCCGATGTGCCGTCCGCGATCGCCGTCATCGCCGAGGCGCGGCCCGACGTCGTGCTGCTCGACGTGCACCTGCCGGGCGGCGCGGGGCAGGACGCGACGGGCGGCGAAGAGGTCATCCGCGGCAGCGGGGGCGTGCCGACGCGGTTCCTGGCGCTGAGCGTGTCGGATGCGGCGGAGGATGTCGTCCGCGTCATCCGGGCGGGCGCGCGCGGATACATCACGAAGGGGTCGTCGGGCGTCGAAGTGAGCCGCGCAGTGCACGCCGTCGCGGGCGGCGACGCCGTGTTCTCGCCGCGGCTGGCCGGCTTCGTGCTCGACGCCTTCGGCGCCGTCGCGGGCGAGACGGCGGCCACGGGCGACGAGCTCGACCGCCTGTCGGCGCGCGAGCAGGAGGTCATGCGCCTCATCGCCCGCGGCTACGCCTACAAGGAGGTCGCGGCCGAGCTGTTCATCTCGGTCAAGACGGTCGAGACGCACGTCTCCGCCGTGCTGCGCAAGCTGCAGCTGTTGTCGCGGCACGAGCTGACCGCGTGGGCGAGTGAGCGGCGGCTGCTCTGA
PROTEIN sequence
Length: 220
VGDAVRVVIVDDHSIFRSGLRSDLDETVVVAGEAADVPSAIAVIAEARPDVVLLDVHLPGGAGQDATGGEEVIRGSGGVPTRFLALSVSDAAEDVVRVIRAGARGYITKGSSGVEVSRAVHAVAGGDAVFSPRLAGFVLDAFGAVAGETAATGDELDRLSAREQEVMRLIARGYAYKEVAAELFISVKTVETHVSAVLRKLQLLSRHELTAWASERRLL*