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SCNpilot_expt_500_p_scaffold_6748_2

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2031..3179)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CPL5_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 385.0
  • Bit_score: 495
  • Evalue 3.70e-137
  • rbh
Hemolysin D {ECO:0000313|EMBL:KFC22454.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 382.0
  • Bit_score: 684
  • Evalue 1.00e-193
RND family efflux transporter MFP subunit; K03585 membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 383.0
  • Bit_score: 405
  • Evalue 1.60e-110
  • rbh

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Taxonomy

Epilithonimonas sp. FH1 → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1149
ATGAGGAATATCGCGCTAAGCTTTTTTGTTGTTTTAGGTCTTTTGACGTCTTGTTCAAAGTCAGAAAATAAAGACAGTAAAAAAGAATTGCCACCACAACCATATCAGTATATTGTTGCGAAAAGTGGATCTGCAGAAAATCTTACCCAATATCCAGCAAGATTAGAAGGTATACAAAATGTAGAGATCCGTCCAAAGATTGACGGATTTGTTGAAAAAATCTATGTAGATGAAGGTAGTCAGGTGAGTAAAGGACAGCTTTTGTTTCTTATAAGAAATCCTCAATACGAGCAATCCGTTTTAGCTGCGCAGGCGACTGTGAATAGTGCAAAAGCACAAGTTGCCACTGCCCAGATGCAGGTCACTAAAACAAAACCTTTGGTAGATAAAAAAATTATTTCTGCTTACGAACTTCAGGCAGCTGAACTAGCACTTAAATCTGCAAAAGCGGCCTTGGCTGAGACTCAAGCACAATTGACCAATGCACAAGTGAATCAAGGTTATACCAGACTATACAGCCCTGTGAGTGGCGTTATCGGTACGCTTCCTTATAAAGCTGGCAGTTATATCAGCAGTGCTACTGCACAACCTTTGACGACAGTTTCCAATATTTCCAAGATATTTGCTTATTTTTCAATTAATGAAAAACAGCAGCTTGATTTTTTTAAACATTCAACAGGAGCAACAATTCAGGAAAAAATTAATAATTCACCTTTGGTTGATTTGATTTTATCTGACGGGAGCAAGTATGACGAAAAAGGAAAAATAGAATCTATCAGTGGTTTGGTTGACCCCAATACTGGTTCTTTTTCTATGCGGGCAACATTTGCAAACCCAAAAGGAATTTTGAGAAGCGGATACAGTGCGACTGTACAGTTACCTAATAACTTGGAAAATGTCATTGTAATTCCGCAATCTGCAACATATGAACTGCAAGGGAAGGTTTTCACTTATATCATCGGAAATGATAACAAAGTAAAATCTACGGAAATCAAAGTTGAAAATCTTCCGGACGGATTGACTTATGCTGTAACTTCTGGTCTTAAGCAAGGTGATAAAGTCGTAGTTGAAGGTATTGGTCTTTTGAAAGATGATACTCAGGTTGTTCCAAAGGAAACGACTTTACAAAATGTCATCAACAAAAAATAA
PROTEIN sequence
Length: 383
MRNIALSFFVVLGLLTSCSKSENKDSKKELPPQPYQYIVAKSGSAENLTQYPARLEGIQNVEIRPKIDGFVEKIYVDEGSQVSKGQLLFLIRNPQYEQSVLAAQATVNSAKAQVATAQMQVTKTKPLVDKKIISAYELQAAELALKSAKAALAETQAQLTNAQVNQGYTRLYSPVSGVIGTLPYKAGSYISSATAQPLTTVSNISKIFAYFSINEKQQLDFFKHSTGATIQEKINNSPLVDLILSDGSKYDEKGKIESISGLVDPNTGSFSMRATFANPKGILRSGYSATVQLPNNLENVIVIPQSATYELQGKVFTYIIGNDNKVKSTEIKVENLPDGLTYAVTSGLKQGDKVVVEGIGLLKDDTQVVPKETTLQNVINKK*