ggKbase home page

SCNpilot_expt_500_p_scaffold_12598_3

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 992..2224

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor NusA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVV0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 410.0
  • Bit_score: 740
  • Evalue 9.20e-211
  • rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 410.0
  • Bit_score: 747
  • Evalue 8.10e-213
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 414.0
  • Bit_score: 712
  • Evalue 6.50e-203
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1233
ATGGATAATTTAGCTTTAATAGAAGCCTTTGGTGATTTTAAAGAAATAAAAAATATCAGCAAAATAGATTTAATGGCTATTATCGAAGATTCTCTTAAGACTCTTCTTAGAAAACGATATGATTCTGATGACCATTTTGATGTGATTGTGAATCCTGATAAAGGAGATTTTCAGATCTTTTTGAACAAAGTGATTGTTGAGGATGAGATGTCTGAGGATGATGACCTGGAAATCGAGATTTCTGAAGTTAGAAAAATTGACCCGACTTTTGAAGTAGGTGAAGAATATACGCAAGAGATTCCTGTTTCCAAATTAGGAAGAAGAAATATCTTAACACTTAAGCAGATCTTGGCTACAAAAATCCAAGAGCATTTTAATGCTGCTTTATATGATCAGTTCCGTGACAAGATTGGAGAATTGGTAGTTGGAGAGGTTCACCATATCCGTCACAAGCACGTGATTTTGTTGGATGATGAAGGGAATGAATTCATTCTTCCAAAAGAAAATCAAATCCCTTCTGATTTTTTCAAAAAAGGTGATAATGTAAGAGCGATTGTGGAAAGTGTGGATTTCAGAGGATCAAAACCTCAGATTATGGTTTCCAGAACAGCGCCTAAATTCCTTGAAGAATTATTAGAGCTTGAGATTCCGGAGATCCAGGATGGAACAATTATCTTGAAAAAAGTAGTTAGAATCCCAGGTGAAAAAGCGAAGATTGCCGTAGATGCTTATGATGATAGAATTGATCCGGTTGGAGCTTGTGTTGGTGTGAAAGGTTCAAGAATCCACGGGGTTGTAAGAGAATTAAGAAACGAAAATATCGATGTGATCCAATGGTCTAAGAATCCTGAGATTCTTGTGAAAAGAGCTTTAGGAAATATTACAATTAATAAGATTGAGGTTAATCCGGAAACTAATTATGCTTTGGTTTATACACCGGTTGACGAGATTTCTAAAGTGATAGGTAAACAAGGTCAGAATATCAAATTGGCATCATGGTTGTCAGGATATGAGATCGATGTTTACAGAGAAACTTCGGAAGATGATGATGTTGAATTAGTAGAGTTCAATGACGAGATCGAATCTTGGATTATCGATGAGTTCAAAAAAGTCGGATTGAATACTGCAAGAAGTGTTCTTGATAAAGATACAGAAGCGTTGCTGAATATTGTTGACCTGGAAGAGGAAACAATTGAAGAAGTGAAAAATATTCTAAGAGAAGAATTAGAATAA
PROTEIN sequence
Length: 411
MDNLALIEAFGDFKEIKNISKIDLMAIIEDSLKTLLRKRYDSDDHFDVIVNPDKGDFQIFLNKVIVEDEMSEDDDLEIEISEVRKIDPTFEVGEEYTQEIPVSKLGRRNILTLKQILATKIQEHFNAALYDQFRDKIGELVVGEVHHIRHKHVILLDDEGNEFILPKENQIPSDFFKKGDNVRAIVESVDFRGSKPQIMVSRTAPKFLEELLELEIPEIQDGTIILKKVVRIPGEKAKIAVDAYDDRIDPVGACVGVKGSRIHGVVRELRNENIDVIQWSKNPEILVKRALGNITINKIEVNPETNYALVYTPVDEISKVIGKQGQNIKLASWLSGYEIDVYRETSEDDDVELVEFNDEIESWIIDEFKKVGLNTARSVLDKDTEALLNIVDLEEETIEEVKNILREELE*