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SCNpilot_expt_500_p_scaffold_25635_1

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3..353)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EQI5_CORAD similarity UNIREF
DB: UNIREF100
  • Identity: 30.1
  • Coverage: 113.0
  • Bit_score: 73
  • Evalue 1.80e-10
Contig38, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77350.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 116.0
  • Bit_score: 136
  • Evalue 1.90e-29
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.1
  • Coverage: 113.0
  • Bit_score: 73
  • Evalue 5.70e-11

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 351
ATGGGAAGTTATTTTTTACCTAACTCGAATGGAACTGTTGATTACAGCAACTGGTTTAGCCGTTTAAACTTTATTATGGGAAATCACAGTCATCTTTCAGGAGAACTGATTGACGACCCTGATGATAAAAAACAGCTTAAAAGGCTTTTGGATGTAATAATTTATGAATACAATAGAAAAGATATTTGTTCTGCATTTGTAATTCAGAATACATTAGTTTCTGTGCTGGCAATCATTTGTAGGAATGTTCAGCAAAAGGCTTGGGGTGGACGAACTTTCAACGATGAAAAATTTGTTGATTTACTCAATTTCATAAGCTTCAATATTCTCGACCCCGAAAAGCTATCCGTT
PROTEIN sequence
Length: 117
MGSYFLPNSNGTVDYSNWFSRLNFIMGNHSHLSGELIDDPDDKKQLKRLLDVIIYEYNRKDICSAFVIQNTLVSVLAIICRNVQQKAWGGRTFNDEKFVDLLNFISFNILDPEKLSV