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SCNpilot_expt_500_p_scaffold_25635_3

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1812..2345

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein RteC family protein n=1 Tax=Empedobacter brevis RepID=UPI000379B377 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 178.0
  • Bit_score: 355
  • Evalue 2.80e-95
Uncharacterized protein {ECO:0000313|EMBL:GAE66362.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 178.0
  • Bit_score: 357
  • Evalue 1.30e-95
tetracycline regulation of excision, rtec similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 178.0
  • Bit_score: 247
  • Evalue 4.40e-63

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Taxonomy

Chryseobacterium indologenes → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 534
ATGACATTTTCATTAAATCATATTATCTCAGATATACAGCGAAAAGAAAATGCAATTTCGCTGTCTGCACCTAATGCAATTGATGAAGCATATCAAATGACCATATACCTGAAAGAATATTTATGGTCAATAAGAGAAGATATTACAAAGCAAGGATTTAAAAACCAATGGGAGGAAATCAATTTCTTCCGCAACATTAAACCATACATTCTCTCCAAACTCATTTACCACAATAAAATATTTCGCATACAGACAGCCTGTCCCGTTGACGGAGGGAAAATGTACGCAAGTTATTTTTCAGAGCAATTGCAGGAATTAAAACAGGAATACAGGGAGCATATCTACAATTCAGATTTTTACCGATATTATCGTTCGGGAAGAACCGACCGTGATGAAACCTACTTTAGATTAGGCAACATCAATTTCCACGATGGACTGAACAGTTTTGTCTTTGAAATAGACCCGCTGTTTTCAACCTATTATGATAACAAAGTCGCTCGGATAATAGCAAATGAGCTACTCTATACCTACATA
PROTEIN sequence
Length: 178
MTFSLNHIISDIQRKENAISLSAPNAIDEAYQMTIYLKEYLWSIREDITKQGFKNQWEEINFFRNIKPYILSKLIYHNKIFRIQTACPVDGGKMYASYFSEQLQELKQEYREHIYNSDFYRYYRSGRTDRDETYFRLGNINFHDGLNSFVFEIDPLFSTYYDNKVARIIANELLYTYI